RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 LAMB3Q13751 1172 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 GALNT3Q14435 633 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 QPCTQ16769 361 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 IER5LQ5T953 404 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 STEAP4Q687X5 459 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 DENND2CQ68D51 928 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 FSTL4Q6MZW2 842 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 CASC4Q6P4E1 433 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 PKN3Q6P5Z2 889 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 CYS1Q717R9 158 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 TMEM135Q86UB9 458 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 ZNF513Q8N8E2 541 aaPredicted RBP12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 BRSK1Q8TDC3 778 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 RMDN1Q96DB5 314 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 OSBPL1AQ9BXW6 950 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 MTG2Q9H4K7 406 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 ZDHHC6Q9H6R6 413 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 IL36AQ9UHA7 158 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 PHTF1Q9UMS5 762 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 SORCS3Q9UPU3 1222 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 PPIL1Q9Y3C6 166 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 TCAF1Q9Y4C2 921 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 STON1Q9Y6Q2 735 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
UBASH3B-207ENST00000530917 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 HEATR9A2RTY3 570 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ANTXRLA6NF34 631 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 SHISA7A6NL88 538 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 LEFTY1O75610 366 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 USP1O94782 785 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 POLBP06746 335 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 HLA-EP13747 358 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 GRIA4P48058 902 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 POLR2LP62875 67 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 MRPS21P82921 87 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 FRG1Q14331 258 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ELAVL3Q14576 367 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 POU6F1Q14863 301 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 MLF2Q15773 248 aaPredicted RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ANKRD20A4Q4UJ75 823 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 SPANXN3Q5MJ09 141 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 NLRP9Q7RTR0 991 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 NDUFAF2Q8N183 169 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 STK40Q8N2I9 435 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF366Q8N895 744 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 PPHLN1Q8NEY8 458 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 LPCAT1Q8NF37 534 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 OR8D1Q8WZ84 308 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 FAM3CQ92520 227 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 CFAP36Q96G28 342 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 NECAB3Q96P71 396 aaPredicted RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 SRPK1Q96SB4 655 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 FAM129BQ96TA1 746 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 ACOX2Q99424 681 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 VPS37BQ9H9H4 285 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 CHRAC1Q9NRG0 131 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 HACD3Q9P035 362 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 DKK3Q9UBP4 350 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 RIMKLBQ9ULI2 386 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 PLAAQ9Y263 795 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 NFS1Q9Y697 457 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
UBASH3B-207ENST00000530917 A0A0J9YYE9 177 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TSPAN11A1L157 253 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 MROH6A6NGR9 719 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 LDB2O43679 373 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 SASH3O75995 380 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 PAPSS2O95340 614 aaPredicted RBP12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TRBC1P01850 177 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 PRNPP04156 253 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 UGT2B4P06133 528 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 EPHX1P07099 455 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 CTSLP07711 333 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 NTSR1P30989 418 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 SLC8A1P32418 973 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TIE1P35590 1138 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 EPHB1P54762 984 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 EIF3BP55884 814 aaKnown RBP12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 PRKCQQ04759 706 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 STAT4Q14765 748 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 FBXO43Q4G163 708 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 ZNF805Q5CZA5 627 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 BRAT1Q6PJG6 821 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TPRG1Q6ZUI0 275 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 TRMT11Q7Z4G4 463 aaKnown RBP12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 CHPFQ8IZ52 775 aa12.07□□□□□ -0.48
UBASH3B-207ENST00000530917 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms