RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OLFM1Q99784 485 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 POLR1EQ9GZS1 481 aaKnown RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 UXTQ9UBK9 157 aaPredicted RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 TLL2Q9Y6L7 1015 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 MOXD2PA6NHM9 499 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 CASQ2O14958 399 aaPredicted RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 AURKAO14965 403 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 HLA-DPA1P20036 260 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 PRAMEP78395 509 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 PEX6Q13608 980 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 PDCD2Q16342 344 aaPredicted RBP17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SIRPB2Q5JXA9 342 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 FAM45BPQ6NSW5 357 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF354CQ86Y25 554 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SHKBP1Q8TBC3 707 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 FAM45AQ8TCE6 357 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 IGSF8Q969P0 613 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF599Q96NL3 588 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 NDNQ99608 321 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 RIMKLBQ9ULI2 386 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 SUFUQ9UMX1 484 aa17.31■□□□□ 0.36
BRCA2-204ENST00000530893 VWA8A3KMH1 1905 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 A8MT66 165 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 PEX1O43933 1283 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 WISP3O95389 354 aaPredicted RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 FGF1P05230 155 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 CCDC166P0CW27 439 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ERFP50548 548 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 RPL26P61254 145 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 MBTPS1Q14703 1052 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF789Q5FWF6 425 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 C10orf120Q5SQS8 335 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 RAP1GAP2Q684P5 730 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 UCMAQ8WVF2 138 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 FEM1CQ96JP0 617 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 PPP1R36Q96LQ0 422 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 RPRD1AQ96P16 312 aaPredicted RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 CATSPER2Q96P56 530 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 KLHL4Q9C0H6 718 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ELAC1Q9H777 363 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 COPG1Q9Y678 874 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 SDHDO14521 159 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 LDB2O43679 373 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 SORBS2O94875 1100 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 S1PR4O95977 384 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 JUNP05412 331 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 SULT2A1Q06520 285 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 TAF10Q12962 218 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 CHSY3Q70JA7 882 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 PTAR1Q7Z6K3 402 aaPredicted RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 PDSS2Q86YH6 399 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 MIB1Q86YT6 1006 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM126BQ8IUX1 230 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 PELI3Q8N2H9 469 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ATAD1Q8NBU5 361 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 GPR150Q8NGU9 434 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 OR6P1Q8NGX9 317 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 MEAF6Q9HAF1 191 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 ACSS2Q9NR19 701 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 SPATS2LQ9NUQ6 558 aaKnown RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
BRCA2-204ENST00000530893 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
BRCA2-204ENST00000530893 CENPFP49454 3210 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 PRAMEF11O60813 436 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 LINGO3P0C6S8 592 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 FGFR3P22607 806 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 SP100P23497 879 aaPredicted RBP17.29■□□□□ 0.36
BRCA2-204ENST00000530893 OR1E1P30953 314 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 NFKB2Q00653 900 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 GPR17Q13304 367 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 MAPRE2Q15555 327 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 PIGGQ5H8A4 983 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 PPM1LQ5SGD2 360 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 FAM171A1Q5VUB5 890 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 ZFP1Q6P2D0 407 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 PGBD5Q8N414 524 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 C2orf15Q8WU43 125 aaKnown RBP17.29■□□□□ 0.36
BRCA2-204ENST00000530893 HDAC10Q969S8 669 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 SGF29Q96ES7 293 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 IFT43Q96FT9 208 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 UTP6Q9NYH9 597 aaKnown RBP17.29■□□□□ 0.36
BRCA2-204ENST00000530893 DLGAP2Q9P1A6 1054 aa17.29■□□□□ 0.36
BRCA2-204ENST00000530893 SLC12A8A0AV02 714 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 TBX18O95935 607 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 RAG1P15918 1043 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 IMPDH1P20839 514 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 INHBCP55103 352 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ART3Q13508 389 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 IHHQ14623 411 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 C5orf22Q49AR2 442 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM198Q66K66 360 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ALG1LQ6GMV1 187 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms