RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FAM90A18PA6NE21 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FAM90A16PA6NEW6 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 MYMKA6NI61 221 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FAM90A5PA8MXJ8 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 GPAA1O43292 621 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 ZBED4O75132 1171 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FGF2P09038 288 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 ALDOCP09972 364 aaKnown RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FAM90A15PP0C7V4 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 FAM90A14PP0C7W9 464 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 TNFRSF1BP20333 461 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 PDIA3P30101 505 aaKnown RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 POLGP54098 1239 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 LINC00205P59089 165 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 TNFAIP2Q03169 654 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 GALNT1Q10472 559 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 SF3A3Q12874 501 aaKnown RBP eCLIP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 PIM3Q86V86 326 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 CPXCR1Q8N123 301 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 ADPRHL1Q8NDY3 354 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 CDX2Q99626 313 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-213ENST00000530784 CRB3Q9BUF7 120 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 THSD1Q9NS62 852 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 RIPK3Q9Y572 518 aa7.53□□□□□ -1.2
CSDE1-213ENST00000530784 PARP14Q460N5 1801 aa7.52□□□□□ -1.2
CSDE1-213ENST00000530784 MYH8P13535 1937 aa7.52□□□□□ -1.2
CSDE1-213ENST00000530784 TBC1D3DA0A087WVF3 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3IA0A087WXS9 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3EA0A087X179 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3KA0A087X1G2 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 IGKV6D-41A0A0C4DH26 115 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 A0A0G2JK05 382 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 KIR2DS5A0A0G2JLQ3 304 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3BA6NDS4 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3FA6NER0 549 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 C3orf70A6NLC5 250 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3LB9A6J9 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 H3BNX3 289 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 KIR2DS3K7RE56 304 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ATP2A1O14983 1001 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 RNF113AO15541 343 aaKnown RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 PRDM1O75626 825 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 WNT1P04628 370 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3HP0C7X1 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ITGB8P26012 769 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ACLYP53396 1101 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 MANEAQ5SRI9 462 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 C20orf194Q5TEA3 1177 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3GQ6DHY5 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3CQ6IPX1 549 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ANKRD33Q7Z3H0 272 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 TBC1D3Q8IZP1 549 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ZNF444Q8N0Y2 327 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 CLEC4CQ8WTT0 213 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 RSC1A1Q92681 617 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 EME1Q96AY2 570 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 SLC39A13Q96H72 371 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 NAF1Q96HR8 494 aaKnown RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 KATNAL1Q9BW62 490 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 AAMDCQ9H7C9 122 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 RAVER2Q9HCJ3 691 aaKnown RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 CLIP2Q9UDT6 1046 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 FBXO40Q9UH90 709 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 FEM1BQ9UK73 627 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 ISY1Q9ULR0 285 aaKnown RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 PCDHA12Q9UN75 941 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 SQORQ9Y6N5 450 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 GREB1LQ9C091 1923 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 BAZ2AQ9UIF9 1905 aaKnown RBP7.52□□□□□ -1.21
CSDE1-213ENST00000530784 MROH7Q68CQ1 1323 aa7.52□□□□□ -1.21
CSDE1-213ENST00000530784 PLIN4Q96Q06 1357 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 CYP3A7-CYP3A51PA0A087WV96 503 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 IGLV5-39A0A0G2JS06 123 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SLC38A8A6NNN8 435 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 DUSP11O75319 330 aaKnown RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SKAP2O75563 359 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 NDUFB8O95169 186 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SNAI1O95863 264 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 TSPY3P0CV98 308 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 TSPY8P0CW00 308 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 FOSL2P15408 326 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 CYP3A7P24462 503 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 CST5P28325 142 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 OAZ1P54368 228 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 RNASELQ05823 741 aaKnown RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 ACVR2BQ13705 512 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 MORC3Q14149 939 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 SMTNL2Q2TAL5 461 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 ZACNQ401N2 412 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 PAQR4Q8N4S7 273 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-213ENST00000530784 GMCL1P1Q8NEA9 526 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 HMGB4Q8WW32 186 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 EID2BQ96D98 161 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 GLT1D1Q96MS3 346 aa7.51□□□□□ -1.21
CSDE1-213ENST00000530784 NACAP1Q9BZK3 213 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms