RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ITM2BQ9Y287 266 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 DOCK9Q9BZ29 2069 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 SCN8AQ9UQD0 1980 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CXorf51AA0A1B0GTR3 108 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 LOC285095A0A1B0GVY8 99 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 A0A1W2PQF6 199 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 PSMD3O43242 534 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CHRNB1P11230 501 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CA4P22748 312 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CES1P23141 567 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 MCM3P25205 808 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 SARNPP82979 210 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 PTPRCAPQ14761 206 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 QPCTQ16769 361 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 RANBP10Q6VN20 620 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CENPUQ71F23 418 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 LINC00523Q86TU6 105 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 KDM1BQ8NB78 822 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 ARRDC3Q96B67 414 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 MKRN2Q9H000 416 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 CD93Q9NPY3 652 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 IL1RAPL1Q9NZN1 696 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 SUN2Q9UH99 717 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 GGT7Q9UJ14 662 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 FNDC3AQ9Y2H6 1198 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 KCTD3Q9Y597 815 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 TCRBV21S2A2A0A5A6 115 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 C16orf96A6NNT2 1141 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 NDC80O14777 642 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 AURKAO14965 403 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 MID1O15344 667 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 HTRA2O43464 458 aaPredicted RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 SOCS5O75159 536 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 ACSL3O95573 720 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 PRNPP04156 253 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 FGF1P05230 155 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 DCNP07585 359 aaKnown RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 HLA-DPA1P20036 260 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 MAGEA3P43357 314 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 MRPS21P82921 87 aaKnown RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 ZXDAP98168 799 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 CDK16Q00536 496 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 CAMK2GQ13555 558 aaPredicted RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 ENPP2Q13822 863 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 GAS6Q14393 721 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 RALGPS1Q5JS13 557 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 TMEM31Q5JXX7 168 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 TMC3Q7Z5M5 1100 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 TSPAN33Q86UF1 283 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 ZNF687Q8N1G0 1237 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 HMGB4Q8WW32 186 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 PIH1D2Q8WWB5 315 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 SHDQ96IW2 340 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 TUBGCP5Q96RT8 1024 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 GABRG3Q99928 467 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 ADGRE3Q9BY15 652 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 CPEB1Q9BZB8 566 aaKnown RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 CDC42EP4Q9H3Q1 356 aaKnown RBP10.71□□□□□ -0.69
SOX6-213ENST00000530378 MFSD1Q9H3U5 465 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 SERGEFQ9UGK8 458 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 ARL5AQ9Y689 179 aa10.71□□□□□ -0.69
SOX6-213ENST00000530378 NPIPB15A6NHN6 443 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 FZD6O60353 706 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PIAS1O75925 651 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 F7P08709 466 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 XPAP23025 273 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 MAGEA4P43358 317 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 COPAP53621 1224 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 STARD6P59095 220 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 FAM193AP78312 1265 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 TMPRSS15P98073 1019 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SATB1Q01826 763 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 LRRC32Q14392 662 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 KYNUQ16719 465 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 FBXO43Q4G163 708 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZNF805Q5CZA5 627 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 DNAJC21Q5F1R6 531 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 KIAA1324Q6UXG2 1013 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 LYSMD3Q7Z3D4 306 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 TRMT11Q7Z4G4 463 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 UNC5BQ8IZJ1 945 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 GANCQ8TET4 914 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 UBLCP1Q8WVY7 318 aaPredicted RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 STAMBPL1Q96FJ0 436 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SIGLEC10Q96LC7 697 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 ZNF778Q96MU6 729 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 HHIPQ96QV1 700 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 CHRAC1Q9NRG0 131 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 NINJ2Q9NZG7 142 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SAMD15Q9P1V8 674 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 SLC2A6Q9UGQ3 507 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 PPM1HQ9ULR3 514 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 MMP17Q9ULZ9 603 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 MRPS17Q9Y2R5 130 aaKnown RBP10.7□□□□□ -0.7
SOX6-213ENST00000530378 USP34Q70CQ2 3546 aa10.7□□□□□ -0.7
SOX6-213ENST00000530378 A0A1W2PP55 124 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms