RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 KCNU1A8MYU2 1149 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 M0QYT0 321 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CHADO15335 359 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 MTA2O94776 668 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 LATS1O95835 1130 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 HMBSP08397 361 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 PDGFRAP16234 1089 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CORO1AP31146 461 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 SDC4P31431 198 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CXCR3P49682 368 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 KPNA1P52294 538 aaPredicted RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 TBX4P57082 545 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 ARHGAP29Q52LW3 1261 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 TRIM68Q6AZZ1 485 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 NADSYN1Q6IA69 706 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CYP4V2Q6ZWL3 525 aaPredicted RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 STRADAQ7RTN6 431 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 BBS7Q8IWZ6 715 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 REXO1L1PQ8IX06 675 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 DTX3Q8N9I9 347 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CCDC112Q8NEF3 446 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 ATRIPQ8WXE1 791 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CTNNBL1Q8WYA6 563 aaPredicted RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 EDAQ92838 391 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CHFRQ96EP1 664 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 PPP1R9BQ96SB3 815 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 DESI2Q9BSY9 194 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 CNPY3Q9BT09 278 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 TRMT61BQ9BVS5 477 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 NUP85Q9BW27 656 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 LINC00597Q9H2U6 94 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 TRPV5Q9NQA5 729 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 SLC2A4RGQ9NR83 387 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 DDIT4Q9NX09 232 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 XPO7Q9UIA9 1087 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 AGO1Q9UL18 857 aaKnown RBP9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 STAP1Q9ULZ2 295 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 SORCS3Q9UPU3 1222 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 HS3ST3A1Q9Y663 406 aa9.03□□□□□ -0.96
CCDC90B-217ENST00000530253 PIEZO1Q92508 2521 aa9.02□□□□□ -0.96
CCDC90B-217ENST00000530253 PJA2O43164 708 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 ARHGAP6O43182 974 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 KLHL18O94889 574 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PDGFBP01127 241 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 CYP17A1P05093 508 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 ARSAP15289 507 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 GDI1P31150 447 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 RDXP35241 583 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 MAGEA1P43355 309 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 VAV2P52735 878 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 HADHBP55084 474 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 DEUP1Q05D60 604 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 NME3Q13232 169 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PRKD1Q15139 912 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PDGFRLQ15198 375 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 FAM133BQ5BKY9 247 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 BRMS1LQ5PSV4 323 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 DCUN1D2Q6PH85 259 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 FAM131BQ86XD5 332 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 NIPA2Q8N8Q9 360 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 NUDT10Q8NFP7 164 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 ZNF564Q8TBZ8 553 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 FAM172AQ8WUF8 416 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 RFFLQ8WZ73 363 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 DNASE1L2Q92874 299 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 AZIN2Q96A70 460 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 OTUB2Q96DC9 234 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 MYEOVQ96EZ4 313 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 NUDT11Q96G61 164 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PRICKLE1Q96MT3 831 aaPredicted RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PEBP4Q96S96 227 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 DCLK3Q9C098 648 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 MRPL47Q9HD33 250 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 DUS2Q9NX74 493 aaKnown RBP9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 ARHGEF38Q9NXL2 777 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 UVRAGQ9P2Y5 699 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 SH3BP1Q9Y3L3 701 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 PCDHA13Q9Y5I0 950 aa9.02□□□□□ -0.97
CCDC90B-217ENST00000530253 SYNJ2BP-COX16A0A087WUM0 186 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 TMEM221A6NGB7 291 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 M0R296 226 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 SMAD7O15105 426 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 ACSL4O60488 711 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 LRCH4O75427 683 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 CNOT4O95628 575 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 F9P00740 461 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 TCF4P15884 667 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 PSMA2P25787 234 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 SLC6A4P31645 630 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 IFNAR2P48551 515 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 VCPP55072 806 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 MAP4K2Q12851 820 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 SF1Q15637 639 aaKnown RBP9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 FXNQ16595 210 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 CDO1Q16878 200 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 SLC35F1Q5T1Q4 408 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 PIK3R6Q5UE93 754 aa9.01□□□□□ -0.97
CCDC90B-217ENST00000530253 DAB2IPQ5VWQ8 1189 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms