RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 OR7D4Q8NG98 312 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 FBXO27Q8NI29 283 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 BRSK1Q8TDC3 778 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 HSPH1Q92598 858 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 ATOH1Q92858 354 aaPredicted RBP6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 ARHGEF2Q92974 986 aaKnown RBP6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 LRRC45Q96CN5 670 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 HHIPQ96QV1 700 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 LACRTQ9GZZ8 138 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 MAGEH1Q9H213 219 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 ZWILCHQ9H900 591 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 PRSS16Q9NQE7 514 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 SALL4Q9UJQ4 1053 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 VPS28Q9UK41 221 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 WDR37Q9Y2I8 494 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 PCDHGA2Q9Y5H1 932 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 RAD54BQ9Y620 910 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 ALG6Q9Y672 507 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 DUSP10Q9Y6W6 482 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 ATG2BQ96BY7 2078 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 KIAA1549LQ6ZVL6 1849 aa6.38□□□□□ -1.39
ATPAF1-209ENST00000529214 TCRBV21S2A2A0A5A6 115 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TARSL2A2RTX5 802 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TTC34A8MYJ7 566 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TGFBR3LH3BV60 316 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 PLD2O14939 933 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 AXIN1O15169 862 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ARHGAP6O43182 974 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 GPR39O43194 453 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 DAPK3O43293 454 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 RASA4O43374 803 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 KDELR3O43731 214 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 SYNCRIPO60506 623 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 FOXD2O60548 495 aaPredicted RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 BUB1BO60566 1050 aaPredicted RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 SNAP91O60641 907 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 RAMP2O60895 175 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF189O75820 626 aaPredicted RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 CD160O95971 181 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MT-CO1P00395 513 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 IL2RAP01589 272 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 KRT7P08729 469 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 HLA-EP13747 358 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ERCC2P18074 760 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 GABRG2P18507 467 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 COMTP21964 271 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 AMPD1P23109 780 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ACVRL1P37023 503 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ARL4AP40617 200 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 NBL1P41271 181 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 NUMBP49757 651 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 NDST2P52849 883 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 CDH6P55285 790 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 NHLH1Q02575 133 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 DHX9Q08211 1270 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 DPYSQ14117 519 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 STARD3Q14849 445 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 PDK2Q15119 407 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 HNRNPA1L2Q32P51 320 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 FNDC3BQ53EP0 1204 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 WDR45BQ5MNZ6 344 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ARMC4Q5T2S8 1044 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 C9orf64Q5T6V5 341 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 LRRC38Q5VT99 294 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 HEATR6Q6AI08 1181 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ANO7Q6IWH7 933 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 RETSATQ6NUM9 610 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MICALCLQ6ZW33 695 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TMPRSS6Q8IU80 811 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 SH2D3CQ8N5H7 860 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 LZTR1Q8N653 840 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ZNF366Q8N895 744 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 DCAF4L2Q8NA75 395 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 KCTD6Q8NC69 237 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 CCDC112Q8NEF3 446 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MDGA1Q8NFP4 955 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TNIP2Q8NFZ5 429 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 OR2T3Q8NH03 318 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 PTPRN2Q92932 1015 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MRGPRX1Q96LB2 322 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ELAC2Q9BQ52 826 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 HERPUD2Q9BSE4 406 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 TSGA10Q9BZW7 698 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MKRN2Q9H000 416 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 KLC2Q9H0B6 622 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 SEMA4AQ9H3S1 761 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 LRRC19Q9H756 370 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 FBRSQ9HAH7 460 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 ATP13A1Q9HD20 1204 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MRGBPQ9NV56 204 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 SLC25A13Q9UJS0 675 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 PRELID1Q9Y255 219 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 HS3ST2Q9Y278 367 aa6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 MYO18AQ92614 2054 aaKnown RBP6.37□□□□□ -1.39
ATPAF1-209ENST00000529214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 PROB1E7EW31 1015 aa6.36□□□□□ -1.39
ATPAF1-209ENST00000529214 H3BRJ5 948 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms