RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TLE6Q9H808 572 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 HAO1Q9UJM8 370 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 LZTS1Q9Y250 596 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 INSL6Q9Y581 213 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 DENND4CQ5VZ89 1909 aa14.85□□□□□ -0.03
ECHDC1-220ENST00000528402 TARM1B6A8C7 271 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 CBX4O00257 560 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 ITM2AO43736 263 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 TBL1XO60907 577 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 HSPA4LO95757 839 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 S1PR4O95977 384 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 FGBP02675 491 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 LTA4HP09960 611 aaKnown RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 IRF1P10914 325 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 SAT1P21673 171 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 TARSP26639 723 aaKnown RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 SCNN1BP51168 640 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 MNAT1P51948 309 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 TAS2R39P59534 338 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 KCNJ2P63252 427 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 IRF9Q00978 393 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 ACAP2Q15057 778 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 SMAD1Q15797 465 aaKnown RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 CES4AQ5XG92 561 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 CXorf57Q6NSI4 855 aaKnown RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 LRRC8EQ6NSJ5 796 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 ZCCHC23Q6ZST2 131 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 FSTL5Q8N475 847 aaPredicted RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC7A6OSQ96CW6 309 aaPredicted RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 SORT1Q99523 831 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 DRC3Q9H069 523 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 NOD2Q9HC29 1040 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 INTS10Q9NVR2 710 aaKnown RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 NLE1Q9NVX2 485 aaPredicted RBP14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 ZNF358Q9NW07 568 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 VTI1BQ9UEU0 232 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 RAP2CQ9Y3L5 183 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 IRAK3Q9Y616 596 aa14.84□□□□□ -0.03
ECHDC1-220ENST00000528402 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 HGSO14964 777 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 CD3EAPO15446 510 aaKnown RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 PHGDHO43175 533 aaKnown RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 TGM5O43548 720 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 NPHS1O60500 1241 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 GREM1O60565 184 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 TSPAN3O60637 253 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 WFS1O76024 890 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 CXCL14O95715 111 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 PENKP01210 267 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 KITP10721 976 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ESRRAP11474 423 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ATP5F1P24539 256 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 DDX6P26196 483 aaKnown RBP eCLIP14.83□□□□□ -0.032e-7■■■□□ 18.3
ECHDC1-220ENST00000528402 MAPK8P45983 427 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 PRKAA1Q13131 559 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 MPPE1Q53F39 396 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 HECTD2Q5U5R9 776 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 RETSATQ6NUM9 610 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 CNSTQ6PJW8 725 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 PTAR1Q7Z6K3 402 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 SLC22A9Q8IVM8 553 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 TNS4Q8IZW8 715 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 CENPLQ8N0S6 344 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ARHGAP24Q8N264 748 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 TMEM151AQ8N4L1 468 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ARL14EPQ8N8R7 260 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 DCAF4L2Q8NA75 395 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ACVR1CQ8NER5 493 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 OR52K2Q8NGK3 314 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 OR4L1Q8NH43 312 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 BLOC1S5Q8TDH9 187 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 KCTD4Q8WVF5 259 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ACDQ96AP0 544 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 RMDN1Q96DB5 314 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 PTCD3Q96EY7 689 aaKnown RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 GPR78Q96P69 363 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 BTBD10Q9BSF8 475 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 GATA5Q9BWX5 397 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 MMADHCQ9H3L0 296 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 ZNF334Q9HCZ1 680 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 FBXO6Q9NRD1 293 aaPredicted RBP14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 SH3BP1Q9Y3L3 701 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 CPQQ9Y646 472 aa14.83□□□□□ -0.03
ECHDC1-220ENST00000528402 OBSL1O75147 1896 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 KIAA1671Q9BY89 1806 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CCDC189A1A4V9 331 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 ZMPSTE24O75844 475 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 GOT2P00505 430 aaKnown RBP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CNPP09543 421 aaKnown RBP14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 ITGB8P26012 769 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 GABRR2P28476 465 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 SLC8A1P32418 973 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 ABCG1P45844 678 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CSNK1DP48730 415 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 RCN2Q14257 317 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 CFAP157Q5JU67 520 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 NCEH1Q6PIU2 408 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 AFTPHQ6ULP2 937 aa14.83□□□□□ -0.04
ECHDC1-220ENST00000528402 C16orf59Q7L2K0 433 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms