RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RPP30P78346 268 aaKnown RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 GALNT2Q10471 571 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 CAPSQ13938 189 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 GPR68Q15743 365 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 ZNF667Q5HYK9 610 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 Q6ZSV7 163 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 PELI3Q8N2H9 469 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 ZNF713Q8N859 430 aaPredicted RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 APPL2Q8NEU8 664 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 CCDC47Q96A33 483 aaKnown RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 TMEM18Q96B42 140 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 APOPT1Q96IL0 206 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 ZMAT2Q96NC0 199 aaKnown RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 MPHOSPH8Q99549 860 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 NUDT16L1Q9BRJ7 211 aaKnown RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 MVB12BQ9H7P6 319 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 PLEKHA5Q9HAU0 1116 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 BABAM1Q9NWV8 329 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 SLC13A4Q9UKG4 626 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 MAGED1Q9Y5V3 778 aaPredicted RBP6.08□□□□□ -1.44
PCF11-202ENST00000528336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCF11-202ENST00000528336 TEX14Q8IWB6 1497 aa6.08□□□□□ -1.44
PCF11-202ENST00000528336 TTC37Q6PGP7 1564 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 TYW5A2RUC4 315 aaKnown RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 C19orf81C9J6K1 198 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 MS4A18H0YCH9 400 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 TNPO2O14787 897 aaKnown RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 OAZ2O95190 189 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 ELF1P32519 619 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 THPOP40225 353 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 CLCN5P51795 746 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 ZNF766Q5HY98 468 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 FNBP1LQ5T0N5 605 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 SLC9C2Q5TAH2 1124 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 OTUD1Q5VV17 481 aaPredicted RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 YME1L1Q96TA2 773 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 TREX2Q9BQ50 279 aaPredicted RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 SF3B5Q9BWJ5 86 aaKnown RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 NPFFR1Q9GZQ6 430 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 EBF3Q9H4W6 596 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 MRPL44Q9H9J2 332 aaKnown RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 WASH6PQ9NQA3 447 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.07□□□□□ -1.44
PCF11-202ENST00000528336 TMCC3Q9ULS5 477 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 ARHGAP26Q9UNA1 814 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 PTGDR2Q9Y5Y4 395 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 PLCH2O75038 1416 aa6.07□□□□□ -1.44
PCF11-202ENST00000528336 ADGRF5Q8IZF2 1346 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 ARAP3Q8WWN8 1544 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 GOLGA6L10A0A0M3HER8 536 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 TEX22C9J3V5 150 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 F5H0A9 414 aaPredicted RBP6.06□□□□□ -1.44
PCF11-202ENST00000528336 CLGNO14967 610 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 RGS14O43566 566 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 LDB2O43679 373 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 HMMRO75330 724 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 LCATP04180 440 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 ALPLP05186 524 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 SNHG28P0DPA3 235 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 SLC2A4P14672 509 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 CTPS1P17812 591 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 LIFRP42702 1097 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 RFX2P48378 723 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 PGGT1BP53609 377 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 GPS2Q13227 327 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 FHL1Q13642 323 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 CAMK1Q14012 370 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 NCAPH2Q6IBW4 605 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 CES5AQ6NT32 575 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 DSTYKQ6XUX3 929 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 GLCCI1Q86VQ1 547 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 RBFAQ8N0V3 343 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 PLD5Q8N7P1 536 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 PCYOX1LQ8NBM8 494 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 AFAP1L1Q8TED9 768 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 NOC3LQ8WTT2 800 aaKnown RBP6.06□□□□□ -1.44
PCF11-202ENST00000528336 ST8SIA4Q92187 359 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 KIF1BPQ96EK5 621 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 RNF125Q96EQ8 232 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 LBHD1Q9BQE6 289 aaPredicted RBP6.06□□□□□ -1.44
PCF11-202ENST00000528336 CHCHD6Q9BRQ6 235 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 FUZQ9BT04 418 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 ZCCHC17Q9NP64 241 aaKnown RBP6.06□□□□□ -1.44
PCF11-202ENST00000528336 UBN1Q9NPG3 1134 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 BEX4Q9NWD9 120 aaPredicted RBP6.06□□□□□ -1.44
PCF11-202ENST00000528336 NSMCE4AQ9NXX6 385 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 CTNNAL1Q9UBT7 734 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 GIMAP2Q9UG22 337 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 ZNF112Q9UJU3 913 aa6.06□□□□□ -1.44
PCF11-202ENST00000528336 PPRC1Q5VV67 1664 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 NCOA2Q15596 1464 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 NEO1Q92859 1461 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 CCDC196A0A1B0GTZ2 297 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 INAFM1C9JVW0 142 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 SPRY3O43610 288 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 ATP2C2O75185 946 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 HOXA11P31270 313 aaPredicted RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 ARRB2P32121 409 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 KRT20P35900 424 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms