RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 DSPP15924 2871 aaKnown RBP10.74□□□□□ -0.69
CD44-227ENST00000528086 FAM149AA5PLN7 773 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 GOLGA8CPA6NN73 597 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 A6NNZ2 444 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 AKR1B15C9JRZ8 316 aaPredicted RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 ENC1O14682 589 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 FZD6O60353 706 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 GCATO75600 419 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 KRT37O76014 449 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 TPM3P06753 285 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ITGAVP06756 1048 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 PROS1P07225 676 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 CELA2BP08218 269 aaPredicted RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 PDHA1P08559 390 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 LHCGRP22888 699 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 GARSP41250 739 aaKnown RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 MARCKSL1P49006 195 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 LIG3P49916 1009 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 SCNN1BP51168 640 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ADCY2Q08462 1091 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 NIPAL4Q0D2K0 466 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 CCDC15Q0P6D6 951 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 SUZ12Q15022 739 aaKnown RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 AGERQ15109 404 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 TAZQ16635 292 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 DHRS13Q6UX07 377 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 UNQ6494/PRO21346Q6UXR6 183 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 LIPIQ6XZB0 460 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 PTAR1Q7Z6K3 402 aaPredicted RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 RBFAQ8N0V3 343 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 CNTD1Q8N815 330 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 DENND6BQ8NEG7 585 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ARRDC2Q8TBH0 407 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 RFFLQ8WZ73 363 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 CNDP2Q96KP4 475 aaKnown RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 TSGA13Q96PP4 275 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 RNF157Q96PX1 679 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 NUDCD1Q96RS6 583 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ZNF670Q9BS34 389 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 CINPQ9BW66 212 aaPredicted RBP10.73□□□□□ -0.69
CD44-227ENST00000528086 DONSONQ9NYP3 566 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 DTLQ9NZJ0 730 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 SEPT3Q9UH03 358 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ATP8A1Q9Y2Q0 1164 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 PCDHB9Q9Y5E1 797 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 KIF26BQ2KJY2 2108 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 PKD1L2Q7Z442 2459 aa10.73□□□□□ -0.69
CD44-227ENST00000528086 ACACAQ13085 2346 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 A0A0U1RQJ8 604 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 A8MX80 341 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 K7ESM1 405 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 NEMP1O14524 444 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 YKT6O15498 198 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 TM7SF2O76062 418 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 TRIM16O95361 564 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 CSF2P04141 144 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 MMP2P08253 660 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 NME1P15531 152 aaKnown RBP10.72□□□□□ -0.69
CD44-227ENST00000528086 DESP17661 470 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 COMTP21964 271 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 SSR1P43307 286 aaKnown RBP10.72□□□□□ -0.69
CD44-227ENST00000528086 ARRB1P49407 418 aaPredicted RBP10.72□□□□□ -0.69
CD44-227ENST00000528086 AP1S1P61966 158 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 RAD51Q06609 339 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 PDE1CQ14123 709 aaPredicted RBP10.72□□□□□ -0.69
CD44-227ENST00000528086 KRT81Q14533 505 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 SMAD1Q15797 465 aaKnown RBP10.72□□□□□ -0.69
CD44-227ENST00000528086 SLC45A4Q5BKX6 768 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 SLC9A4Q6AI14 798 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 BRAT1Q6PJG6 821 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 NPNTQ6UXI9 565 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 B4GALNT4Q76KP1 1039 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 DPPA4Q7L190 304 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 TSPAN33Q86UF1 283 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 OXR1Q8N573 874 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 OR4C6Q8NH72 309 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 PIH1D2Q8WWB5 315 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 SKA1Q96BD8 255 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 IFT43Q96FT9 208 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 CCDC42Q96M95 316 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 COQ10AQ96MF6 247 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 LGMNQ99538 433 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 HERPUD2Q9BSE4 406 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 TRIM5Q9C035 493 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 CLPBQ9H078 707 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 ATP13A3Q9H7F0 1226 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 NT5MQ9NPB1 228 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 B4GALT6Q9UBX8 382 aa10.72□□□□□ -0.69
CD44-227ENST00000528086 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.69
CD44-227ENST00000528086 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
CD44-227ENST00000528086 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
CD44-227ENST00000528086 FFAR2O15552 330 aa10.71□□□□□ -0.69
CD44-227ENST00000528086 RECQL5O94762 991 aaPredicted RBP10.71□□□□□ -0.69
CD44-227ENST00000528086 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms