RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SPOCK2Q92563 424 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ECHDC3Q96DC8 303 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 EXOC2Q96KP1 924 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 PSKH2Q96QS6 385 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 WRAP53Q9BUR4 548 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
CAPN1-212ENST00000527887 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 ATP8A1Q9Y2Q0 1164 aa14.31□□□□□ -0.12
CAPN1-212ENST00000527887 CELSR3Q9NYQ7 3312 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 URB1O60287 2271 aaKnown RBP14.3□□□□□ -0.12
CAPN1-212ENST00000527887 LY6G6EA0A0G2JKS1 128 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-212ENST00000527887 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 BUB1BO60566 1050 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-212ENST00000527887 NEBLO76041 1014 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 PIGNO95427 931 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 SERPING1P05155 500 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 ANXA6P08133 673 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 ALPIP09923 528 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 SKILP12757 684 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 C6P13671 934 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 ITIH2P19823 946 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 NFKBIAP25963 317 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 MMP12P39900 470 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 LIG3P49916 1009 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 UBASH3AP57075 661 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 AP1S1P61966 158 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 ZBED6P86452 979 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 FANCCQ00597 558 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 SEMG2Q02383 582 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 MTM1Q13496 603 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 DPYSQ14117 519 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 NR0B2Q15466 257 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 WSCD2Q2TBF2 565 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 PRRT3Q5FWE3 981 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 FAXCQ5TGI0 409 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 PDZD3Q86UT5 571 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 CAMK1DQ8IU85 385 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 LRRC49Q8IUZ0 686 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 BBS5Q8N3I7 341 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 IFI44Q8TCB0 444 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 TEKT4Q8WW24 435 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 FGF11Q92914 225 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 NAT6Q93015 286 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 BOCQ9BWV1 1114 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 TRIM7Q9C029 511 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 MBNL1Q9NR56 388 aaKnown RBP14.3□□□□□ -0.12
CAPN1-212ENST00000527887 KCTD5Q9NXV2 234 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 MYO1AQ9UBC5 1043 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 RALYQ9UKM9 306 aaKnown RBP14.3□□□□□ -0.12
CAPN1-212ENST00000527887 U3KQA8 63 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 CACNA1GO43497 2377 aa14.3□□□□□ -0.12
CAPN1-212ENST00000527887 DFFAO00273 331 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 HOXC4P09017 264 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 PBX1P40424 430 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 EIF2S3P41091 472 aaKnown RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 ABCG1P45844 678 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 CLDN6P56747 220 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 LBRQ14739 615 aaKnown RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 NFATC4Q14934 902 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 IRF4Q15306 451 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 ELOCQ15369 112 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 TDRD12Q587J7 1177 aaKnown RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 RALGPS1Q5JS13 557 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 LRRC73Q5JTD7 316 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 TPRG1LQ5T0D9 272 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 C6orf132Q5T0Z8 1188 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 HGSNATQ68CP4 663 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 ESRP1Q6NXG1 681 aaKnown RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 NETO2Q8NC67 525 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 MAPK15Q8TD08 544 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 APOOQ9BUR5 198 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 RCOR3Q9P2K3 495 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-212ENST00000527887 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 CAPN11Q9UMQ6 739 aa14.29□□□□□ -0.12
CAPN1-212ENST00000527887 YY2O15391 372 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 SOCS5O75159 536 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 GCATO75600 419 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 TCEA3O75764 348 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 DXOO77932 396 aaKnown RBP14.28□□□□□ -0.12
CAPN1-212ENST00000527887 RASGRP1O95267 797 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 CTSEP14091 401 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 KELP23276 732 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 SERPINB6P35237 376 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 LSSP48449 732 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 SCNN1BP51168 640 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 HK3P52790 923 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 ADKP55263 362 aaKnown RBP14.28□□□□□ -0.12
CAPN1-212ENST00000527887 TP53BP1Q12888 1972 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-212ENST00000527887 INPP5AQ14642 412 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 DEFB133Q30KQ1 61 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 KDM7AQ6ZMT4 941 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 NPWQ8N729 165 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 OR6C4Q8NGE1 309 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 NSMCE1Q8WV22 266 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms