RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 PCDH12Q9NPG4 1184 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
CAPN1-207ENST00000527189 LUC7L2Q9Y383 392 aaKnown RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 URB1O60287 2271 aaKnown RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 TDRD6O60522 2096 aaKnown RBP13.51□□□□□ -0.25
CAPN1-207ENST00000527189 A0A087WV48 116 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 OPA1O60313 960 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 MT-CO3P00414 261 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 CYP1A2P05177 515 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 ITIH2P19823 946 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 IL1R2P27930 398 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 HTR1BP28222 390 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 RPIAP49247 311 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 AP1S1P61966 158 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 LBRQ14739 615 aaKnown RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 WSCD2Q2TBF2 565 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 LRRC73Q5JTD7 316 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 TPRG1LQ5T0D9 272 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 CDCP2Q5VXM1 449 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 TMCO3Q6UWJ1 677 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 LRRC49Q8IUZ0 686 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 NPWQ8N729 165 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 TPCN2Q8NHX9 752 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 GLMNQ92990 594 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 WRAP53Q9BUR4 548 aaKnown RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 SLC13A1Q9BZW2 595 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 MBNL1Q9NR56 388 aaKnown RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 APOBEC3BQ9UH17 382 aaKnown RBP13.5□□□□□ -0.25
CAPN1-207ENST00000527189 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
CAPN1-207ENST00000527189 A0A087X0T9 212 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LY6G6EA0A0G2JKS1 128 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 EME2A4GXA9 379 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LMO7DNF2Z398 122 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 MYO1FO00160 1098 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 TRAFD1O14545 582 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LZTS3O60299 673 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 NEBLO76041 1014 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 TPM3P06753 285 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 FAM228BP0C875 321 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 RARAP10276 462 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 C6P13671 934 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 SERPINB6P35237 376 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 MMP12P39900 470 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 RGRP47804 291 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LIG3P49916 1009 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 SCNN1BP51168 640 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 PPARDQ03181 441 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 FAXCQ5TGI0 409 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 ALKBH5Q6P6C2 394 aaKnown RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 PDZD3Q86UT5 571 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 PHACTR4Q8IZ21 702 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 BBS5Q8N3I7 341 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 FSTL5Q8N475 847 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LMX1AQ8TE12 382 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 CPLX3Q8WVH0 158 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 BOCQ9BWV1 1114 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 THAP2Q9H0W7 228 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 ABCG4Q9H172 646 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 KCTD5Q9NXV2 234 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 RCOR3Q9P2K3 495 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 LCMT1Q9UIC8 334 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAPN1-207ENST00000527189 U3KQA8 63 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 HECTD1Q9ULT8 2610 aa13.49□□□□□ -0.25
CAPN1-207ENST00000527189 ASXL3Q9C0F0 2248 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 ANXA6P08133 673 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 HOXC4P09017 264 aaPredicted RBP13.48□□□□□ -0.25
CAPN1-207ENST00000527189 AMPD1P23109 780 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 NFKBIAP25963 317 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 HNRNPH3P31942 346 aaKnown RBP13.48□□□□□ -0.25
CAPN1-207ENST00000527189 HK3P52790 923 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 CLDN6P56747 220 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 MTM1Q13496 603 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 INPP5AQ14642 412 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 IRF4Q15306 451 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 ELOCQ15369 112 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 HADHQ16836 314 aaKnown RBP13.48□□□□□ -0.25
CAPN1-207ENST00000527189 SMTNL2Q2TAL5 461 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 PRRT3Q5FWE3 981 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 C19orf48Q6RUI8 117 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 ARHGAP36Q6ZRI8 547 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 LSMEM2Q8N112 164 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 WDR48Q8TAF3 677 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 FAM71BQ8TC56 605 aa13.48□□□□□ -0.25
CAPN1-207ENST00000527189 IFI44Q8TCB0 444 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms