RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PLEKHA2Q9HB19 425 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CYSLTR2Q9NS75 346 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 TMLHEQ9NVH6 421 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 FNIP2Q9P278 1114 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 NDRG3Q9UGV2 375 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 CLDN16Q9Y5I7 305 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 PRSS21Q9Y6M0 314 aa2.68□□□□□ -1.98
ECHDC1-219ENST00000526299 GOLGA6L3A6NEY3 463 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 NDUFS7O75251 213 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 METTL18O95568 372 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 HLA-DOBP13765 273 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 TRIM27P14373 513 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 CD53P19397 219 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 ARHGEF6Q15052 776 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 EFNB3Q15768 340 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 SH2D4BQ5SQS7 431 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 STXBP4Q6ZWJ1 553 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 SYT13Q7L8C5 426 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 CHD1LQ86WJ1 897 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 DNAAF1Q8NEP3 725 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 CDCA5Q96FF9 252 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 ZNF583Q96ND8 569 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 ATOH8Q96SQ7 321 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 KXD1Q9BQD3 176 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 HERC2P3Q9BVR0 1158 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 UBXN6Q9BZV1 441 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 PABPC3Q9H361 631 aaKnown RBP2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 KLHL1Q9NR64 748 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 CHST12Q9NRB3 414 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 FAM118AQ9NWS6 357 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 FAF1Q9UNN5 650 aaPredicted RBP2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 CNPY2Q9Y2B0 182 aa2.67□□□□□ -1.98
ECHDC1-219ENST00000526299 FAM90A20PA6NIJ5 464 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 LGALS16A8MUM7 142 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 WNT9BO14905 357 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 FFAR2O15552 330 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 HBP1O60381 514 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 RFPL2O75678 378 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 NR1D1P20393 614 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 PNPLA4P41247 253 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 AK2P54819 239 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 DSCR10P59022 87 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 IRX6P78412 446 aaPredicted RBP2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 SOWAHAQ2M3V2 549 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 SLC35E4Q6ICL7 350 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 CEACAM20Q6UY09 585 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 B3GNT6Q6ZMB0 384 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 KRBA2Q6ZNG9 492 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 SLC20A1Q8WUM9 679 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 RND1Q92730 232 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 ERGIC1Q969X5 290 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 OTULINQ96BN8 352 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 ZNF524Q96C55 264 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 TMEM41AQ96HV5 264 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 CTDSP1Q9GZU7 261 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 TLR8Q9NR97 1041 aaKnown RBP2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 CDC23Q9UJX2 597 aa2.66□□□□□ -1.98
ECHDC1-219ENST00000526299 E7EVH7 732 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 SEPT4O43236 478 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PLRG1O43660 514 aaKnown RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 DHX16O60231 1041 aaKnown RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 KRT38O76015 456 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 MTA2O94776 668 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 ADAP00813 363 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 SP100P23497 879 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 HNRNPH1P31943 449 aaKnown RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 TMPOP42166 694 aaKnown RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 RBM5P52756 815 aaKnown RBP eCLIP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PNLIPRP1P54315 467 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PITX1P78337 314 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 THOC5Q13769 683 aaKnown RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PFKFB4Q16877 469 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PDSS1Q5T2R2 415 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 GFRALQ6UXV0 394 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 ZNF852Q6ZMS4 543 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 KCTD8Q6ZWB6 473 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 TMEM219Q86XT9 240 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 KMT5CQ86Y97 462 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 HCAR2Q8TDS4 363 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 GDPD5Q8WTR4 605 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 HSPH1Q92598 858 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 MYD88Q99836 296 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 FSD1Q9BTV5 496 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PLEKHA5Q9HAU0 1116 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 ENTPD7Q9NQZ7 604 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 C1RLQ9NZP8 487 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 IFT80Q9P2H3 777 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 HDAC6Q9UBN7 1215 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 PCDHGB5Q9Y5G0 923 aa2.65□□□□□ -1.99
ECHDC1-219ENST00000526299 KRTAP16-1A8MUX0 517 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 PCDH7O60245 1069 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 CSF1P09603 554 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 PATE4P0C8F1 98 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 SRD5A1P18405 259 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 CHRNB4P30926 498 aa2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 LUMP51884 338 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 IRX1P78414 480 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-219ENST00000526299 NEDD9Q14511 834 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms