RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 C6P13671 934 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 DGKAP23743 735 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 HSPA9P38646 679 aaKnown RBP17.12■□□□□ 0.33
CCS-203ENST00000526058 MMP12P39900 470 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 GARSP41250 739 aaKnown RBP17.12■□□□□ 0.33
CCS-203ENST00000526058 MMP13P45452 471 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 GALNT2Q10471 571 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 SLC10A2Q12908 348 aaPredicted RBP17.12■□□□□ 0.33
CCS-203ENST00000526058 RALGDSQ12967 914 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 TCEAL1Q15170 157 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 PAF1Q8N7H5 531 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 MRFAP1L1Q96HT8 127 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 NUDCD1Q96RS6 583 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 MGME1Q9BQP7 344 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 TMEM121BQ9BXQ6 578 aaPredicted RBP17.12■□□□□ 0.33
CCS-203ENST00000526058 NT5MQ9NPB1 228 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 KLF15Q9UIH9 416 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 TFR2Q9UP52 801 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 MSRB2Q9Y3D2 182 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 HYOU1Q9Y4L1 999 aa17.12■□□□□ 0.33
CCS-203ENST00000526058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.11■□□□□ 0.33
CCS-203ENST00000526058 LRRD1A4D1F6 860 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 FAM221BA6H8Z2 402 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 A8MX80 341 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 TRIM38O00635 465 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 PIAS2O75928 621 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 MAGEA1P43355 309 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 POLR2LP62875 67 aaKnown RBP17.11■□□□□ 0.33
CCS-203ENST00000526058 GBE1Q04446 702 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 EIF2B5Q13144 721 aaKnown RBP17.11■□□□□ 0.33
CCS-203ENST00000526058 IRF4Q15306 451 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 UNQ6494/PRO21346Q6UXR6 183 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 LRRC49Q8IUZ0 686 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 BBS5Q8N3I7 341 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 TEX26Q8N6G2 289 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 PDCD6IPQ8WUM4 868 aaKnown RBP17.11■□□□□ 0.33
CCS-203ENST00000526058 GATA6Q92908 595 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 RNF157Q96PX1 679 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 CACNA1BQ00975 2339 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 FREM2Q5SZK8 3169 aa17.11■□□□□ 0.33
CCS-203ENST00000526058 ZZEF1O43149 2961 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 C3orf70A6NLC5 250 aaPredicted RBP17.1■□□□□ 0.33
CCS-203ENST00000526058 MATN3O15232 486 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 HTRA2O43464 458 aaPredicted RBP17.1■□□□□ 0.33
CCS-203ENST00000526058 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 LZTS3O60299 673 aaPredicted RBP17.1■□□□□ 0.33
CCS-203ENST00000526058 LCA5LO95447 670 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 GIMD1P0DJR0 217 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 TNNT1P13805 278 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 ITKQ08881 620 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 TRAF2Q12933 501 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 LRRC14Q15048 493 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 IFI16Q16666 785 aaKnown RBP17.1■□□□□ 0.33
CCS-203ENST00000526058 WSCD2Q2TBF2 565 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 PARGQ86W56 976 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 MARCH9Q86YJ5 346 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 PNMA8BQ9ULN7 279 aaPredicted RBP17.1■□□□□ 0.33
CCS-203ENST00000526058 DMXL2Q8TDJ6 3036 aa17.1■□□□□ 0.33
CCS-203ENST00000526058 KNTC1P50748 2209 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 FFAR2O15552 330 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 SOCS5O75159 536 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 CSF2P04141 144 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 NME1P15531 152 aaKnown RBP17.09■□□□□ 0.33
CCS-203ENST00000526058 COMTP21964 271 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 CCNCP24863 283 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 NOP2P46087 812 aaKnown RBP17.09■□□□□ 0.33
CCS-203ENST00000526058 THOP1P52888 689 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 HNRNPKP61978 463 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCS-203ENST00000526058 IHHQ14623 411 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 AGERQ15109 404 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 PROX2Q3B8N5 592 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 DHRS13Q6UX07 377 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 LIPIQ6XZB0 460 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 DPPA4Q7L190 304 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCS-203ENST00000526058 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 MAML1Q92585 1016 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 TSGA13Q96PP4 275 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 SEMA3CQ99985 751 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 TCEAL2Q9H3H9 227 aaPredicted RBP17.09■□□□□ 0.33
CCS-203ENST00000526058 GOLPH3Q9H4A6 298 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 B4GALT6Q9UBX8 382 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 PCDHA13Q9Y5I0 950 aa17.09■□□□□ 0.33
CCS-203ENST00000526058 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 NEBLO76041 1014 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
CCS-203ENST00000526058 KRT1P04264 644 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 JUNDP17535 347 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 GM2AP17900 193 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 SLC1A1P43005 524 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 ACADVLP49748 655 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 YPEL5P62699 121 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 ZNF211Q13398 564 aaPredicted RBP17.08■□□□□ 0.32
CCS-203ENST00000526058 PTK2BQ14289 1009 aa17.08■□□□□ 0.32
CCS-203ENST00000526058 INPP5AQ14642 412 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms