RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MTIF3Q9H2K0 278 aaKnown RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 TTYH1Q9H313 450 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 SLC22A11Q9NSA0 550 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 HIF1ANQ9NWT6 349 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 IGSF9Q9P2J2 1179 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 MORF4L1Q9UBU8 362 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 POLLQ9UGP5 575 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 ERRFI1Q9UJM3 462 aaPredicted RBP1.84□□□□□ -2.11
CD44-212ENST00000524922 PKP3Q9Y446 797 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 PCDHGB1Q9Y5G3 927 aa1.84□□□□□ -2.11
CD44-212ENST00000524922 LAMB2P55268 1798 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 ASPMQ8IZT6 3477 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 UTYO14607 1347 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 GAKO14976 1311 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 PFASO15067 1338 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 CACNA1SQ13698 1873 aa1.84□□□□□ -2.12
CD44-212ENST00000524922 SETXQ7Z333 2677 aaKnown RBP1.84□□□□□ -2.12
CD44-212ENST00000524922 COL4A6Q14031 1691 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 MAST2Q6P0Q8 1798 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 OTOGLQ3ZCN5 2332 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 BRWD1Q9NSI6 2320 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 WDFY4Q6ZS81 3184 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 PNMA6EA0A0J9YXQ4 647 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FSD2A1L4K1 749 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 GOLGA6CA6NDK9 693 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 GOLGA6BA6NDN3 693 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A18PA6NE21 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A16PA6NEW6 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 C3orf70A6NLC5 250 aaPredicted RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A9PA6NNJ1 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A5PA8MXJ8 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 SLC16A5O15375 505 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 GLP2RO95838 553 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 CYP1A2P05177 515 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A15PP0C7V4 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM90A14PP0C7W9 464 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 GOLGA6DP0CG33 693 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FCGR1AP12314 374 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 KLRK1P26718 216 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 THPOP40225 353 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 KCNJ4P48050 445 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 CLCN5P51795 746 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 PRKCZQ05513 592 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 SLC39A6Q13433 755 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 VGLL4Q14135 290 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 CSHL1Q14406 222 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TAF7Q15545 349 aaPredicted RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 ZRSR1Q15695 479 aaKnown RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 HLFQ16534 295 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ARL13BQ3SXY8 428 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ZNF718Q3SXZ3 478 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TRIM60Q495X7 471 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 CCDC152Q4G0S7 254 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TDRD12Q587J7 1177 aaKnown RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 DNTTIP2Q5QJE6 756 aaKnown RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 C10orf76Q5T2E6 689 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 PSRC1Q6PGN9 363 aaPredicted RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 Q7L0L9 218 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ANKRD33Q7Z3H0 272 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 SMIM29Q86T20 159 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 CCDC33Q8N5R6 958 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TMEM217Q8N7C4 229 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ADPRHL1Q8NDY3 354 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 OR1N1Q8NGS0 311 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TBC1D22AQ8WUA7 517 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 USP6NLQ92738 828 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 TAF15Q92804 592 aaKnown RBP eCLIP1.83□□□□□ -2.12
CD44-212ENST00000524922 APOLD1Q96LR9 279 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 EIF3CQ99613 913 aaKnown RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 LBHD1Q9BQE6 289 aaPredicted RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 ISCA1Q9BUE6 129 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 MECRQ9BV79 373 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.83□□□□□ -2.12
CD44-212ENST00000524922 GAREM1Q9H706 876 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 Q9N2J8 555 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 STARD7Q9NQZ5 370 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 HELLSQ9NRZ9 838 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ZDHHC7Q9NXF8 308 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 GOLGA6AQ9NYA3 693 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FZD10Q9ULW2 581 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 FAM50BQ9Y247 325 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 USP16Q9Y5T5 823 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 COPG1Q9Y678 874 aaKnown RBP1.83□□□□□ -2.12
CD44-212ENST00000524922 TAF1P21675 1872 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 MROH7Q68CQ1 1323 aa1.83□□□□□ -2.12
CD44-212ENST00000524922 ECM29Q5VYK3 1845 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 GCN1Q92616 2671 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 SCN9AQ15858 1988 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 SLC38A8A6NNN8 435 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 APAF1O14727 1248 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TNPO2O14787 897 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 MSI1O43347 362 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 DCXO43602 365 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 LDB3O75112 727 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 UFL1O94874 794 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 TFRCP02786 760 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 ALDOAP04075 364 aaKnown RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 PCCAP05165 728 aaPredicted RBP1.82□□□□□ -2.12
CD44-212ENST00000524922 SRGAP2BP0DMP2 458 aa1.82□□□□□ -2.12
CD44-212ENST00000524922 UNGP13051 313 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms