RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MMP20O60882 483 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 PCDH8O95206 1070 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 PGLSO95336 258 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 PAK4O96013 591 aaPredicted RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 APOC2P02655 101 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 CCDC175P0C221 793 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 CD59P13987 128 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 PTPN3P26045 913 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 CD38P28907 300 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 CD68P34810 354 aaPredicted RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 RPS21P63220 83 aaKnown RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 SKOR1P84550 965 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SEMG2Q02383 582 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 ZNF211Q13398 564 aaPredicted RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 AGERQ15109 404 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 NOMO1Q15155 1222 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SHBQ15464 509 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 ZNF423Q2M1K9 1284 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SETMARQ53H47 684 aaPredicted RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 TEX44Q53QW1 395 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 MEI1Q5TIA1 1274 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 KDM7AQ6ZMT4 941 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 DBX2Q6ZNG2 339 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 ABI3BPQ7Z7G0 1075 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 PIP4P1Q86T03 277 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 REXO1L1PQ8IX06 675 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SYCE1Q8N0S2 351 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 MINDY1Q8N5J2 469 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 MFSD2AQ8NA29 543 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 NSMCE1Q8WV22 266 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 QKIQ96PU8 341 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLN8-207ENST00000524258 SMIM14Q96QK8 99 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 MCCC1Q96RQ3 725 aaPredicted RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 ZDHHC5Q9C0B5 715 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 POLR1EQ9GZS1 481 aaKnown RBP12.04□□□□□ -0.48
CLN8-207ENST00000524258 FZD3Q9NPG1 666 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 TMEM9BQ9NQ34 198 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 SCUBE2Q9NQ36 999 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 HS3ST3A1Q9Y663 406 aa12.04□□□□□ -0.48
CLN8-207ENST00000524258 NCOR2Q9Y618 2525 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 CFAP69A5D8W1 941 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 POM121BA6NF01 834 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 PCNX2A6NKB5 2137 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 H0Y8X5 98 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 KCNK3O14649 394 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 PPP1R12AO14974 1030 aaPredicted RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 HNRNPA2B1P22626 353 aaKnown RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 CES1P23141 567 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 CLDN2P57739 230 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 NXPH1P58417 271 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 AP1B1Q10567 949 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 XRCC4Q13426 336 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 HLA-BQ31612 363 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 LIPIQ6XZB0 460 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 DPPA4Q7L190 304 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 IQCHQ86VS3 1027 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 BBS5Q8N3I7 341 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 TP53I13Q8NBR0 393 aaPredicted RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 ACTL9Q8TC94 416 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 P3H4Q92791 437 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 HAUS1Q96CS2 278 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 IMP4Q96G21 291 aaKnown RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 TEKT5Q96M29 485 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 TRIB3Q96RU7 358 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 TLR10Q9BXR5 811 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 CEP41Q9BYV8 373 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 CAAP1Q9H8G2 361 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 C10orf88Q9H8K7 445 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 USP29Q9HBJ7 922 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 LZTFL1Q9NQ48 299 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
CLN8-207ENST00000524258 PCDHB9Q9Y5E1 797 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 ADAMTS9Q9P2N4 1935 aa12.03□□□□□ -0.48
CLN8-207ENST00000524258 HACD1B0YJ81 288 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 TLR4O00206 839 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 SYPP08247 313 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 ZNF883P0CG24 379 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 LHCGRP22888 699 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 LIG3P49916 1009 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 OTUD4Q01804 1114 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 ELP6Q0PNE2 266 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 OVGP1Q12889 678 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 CDKN3Q16667 212 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 WSCD2Q2TBF2 565 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 ODF2Q5BJF6 829 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 SLC45A4Q5BKX6 768 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 BZW1Q7L1Q6 419 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 KANSL1Q7Z3B3 1105 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 CCDC50Q8IVM0 306 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 SLC22A18ASQ8N1D0 253 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 TFB1MQ8WVM0 346 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
CLN8-207ENST00000524258 SCRN2Q96FV2 425 aa12.02□□□□□ -0.49
CLN8-207ENST00000524258 COQ10AQ96MF6 247 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms