RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 PCDH12Q9NPG4 1184 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 SEPT11Q9NVA2 429 aaKnown RBP12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PADI4Q9UM07 663 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 PTPRQQ9UMZ3 2332 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 AP4E1Q9UPM8 1137 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 DGKBQ9Y6T7 804 aa12.75□□□□□ -0.37
TOP1MT-217ENST00000523417 MYLKQ15746 1914 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 EEF2KO00418 725 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 TRAFD1O14545 582 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 TNFRSF10CO14798 259 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 RNF8O76064 485 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 MPOP05164 745 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ERCC2P18074 760 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 PSMA2P25787 234 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 HTR1BP28222 390 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 PCK1P35558 622 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ANP32AP39687 249 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 MMP12P39900 470 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 LIG3P49916 1009 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 GABREP78334 506 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 IL10RBQ08334 325 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 MTM1Q13496 603 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 INPP5AQ14642 412 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 NFATC4Q14934 902 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 IRF4Q15306 451 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 CA9Q16790 459 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 CCDC183Q5T5S1 534 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ESRP1Q6NXG1 681 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 OGFOD3Q6PK18 319 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 RBM44Q6ZP01 1051 aaKnown RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 CYP4V2Q6ZWL3 525 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 CAMK1DQ8IU85 385 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ARHGAP12Q8IWW6 846 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 RBFAQ8N0V3 343 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 CBARPQ8N350 705 aaPredicted RBP12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ZNF599Q96NL3 588 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 PSKH2Q96QS6 385 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ATP13A3Q9H7F0 1226 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 THSD1Q9NS62 852 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ATP8A1Q9Y2Q0 1164 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 ENTPD2Q9Y5L3 495 aa12.74□□□□□ -0.37
TOP1MT-217ENST00000523417 A0A1W2PNU3 283 aaPredicted RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 CDRT15L2A8MXV6 281 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 TMX2-CTNND1H3BSU7 103 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 PALMO75781 387 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 RASGRP1O95267 797 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 PIGNO95427 931 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 C6P13671 934 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 SERPINA4P29622 427 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 MIPP30301 263 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 RENBPP51606 427 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 TYRO3Q06418 890 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 C1orf61Q13536 156 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 ALG11Q2TAA5 492 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 LRRC73Q5JTD7 316 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 PERM1Q5SV97 790 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 ZSWIM9Q86XI8 627 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 ARL10Q8N8L6 244 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 NETO2Q8NC67 525 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 WDR36Q8NI36 951 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 SLC39A7Q92504 469 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 CCDC97Q96F63 343 aaPredicted RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 FCRL3Q96P31 734 aaPredicted RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 PEBP4Q96S96 227 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 WRAP53Q9BUR4 548 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 HAUS4Q9H6D7 363 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 KCTD5Q9NXV2 234 aa12.73□□□□□ -0.37
TOP1MT-217ENST00000523417 A0A1W2PQ67 120 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 LRRC53A6NM62 1247 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 EIF4E1BA6NMX2 242 aaKnown RBP12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.377e-10■■■■□ 25.2
TOP1MT-217ENST00000523417 MUSKO15146 869 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 DAPK3O43293 454 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 PRPSAP2O60256 369 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 MYBL1P10243 752 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 PNLIPP16233 465 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 RGRP47804 291 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 KIAA1024LP59773 190 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 AP1S1P61966 158 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 DPYSQ14117 519 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 FIGNQ5HY92 759 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 LIPIQ6XZB0 460 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 DPPA4Q7L190 304 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 ZNF571Q7Z3V5 609 aaPredicted RBP12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 CLEC14AQ86T13 490 aa12.72□□□□□ -0.37
TOP1MT-217ENST00000523417 GKN2Q86XP6 184 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms