RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 MBNL1Q9NR56 388 aaKnown RBP16.35■□□□□ 0.21
CLN8-206ENST00000523237 ZNHIT6Q9NWK9 470 aaKnown RBP16.35■□□□□ 0.21
CLN8-206ENST00000523237 CTTNBP2NLQ9P2B4 639 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 UVRAGQ9P2Y5 699 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 DKK4Q9UBT3 224 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 LCMT1Q9UIC8 334 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 KLF15Q9UIH9 416 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 COQ6Q9Y2Z9 468 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 WDFY3Q8IZQ1 3526 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 DMXL2Q8TDJ6 3036 aa16.35■□□□□ 0.21
CLN8-206ENST00000523237 ZZEF1O43149 2961 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.34■□□□□ 0.21
CLN8-206ENST00000523237 SSU72P8A0A1W2PR75 194 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 K7ESM1 405 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 TAF4O00268 1085 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 AQP9O43315 295 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 LZTS3O60299 673 aaPredicted RBP16.34■□□□□ 0.21
CLN8-206ENST00000523237 MAFKO60675 156 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 NEBLO76041 1014 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 LIG3P49916 1009 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 PEX5P50542 639 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 DUSP3P51452 185 aaPredicted RBP16.34■□□□□ 0.21
CLN8-206ENST00000523237 E2F1Q01094 437 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 AGERQ15109 404 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 TSR1Q2NL82 804 aaKnown RBP16.34■□□□□ 0.21
CLN8-206ENST00000523237 WSCD2Q2TBF2 565 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 FAM181AQ8N9Y4 354 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 LMX1AQ8TE12 382 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 APOLD1Q96LR9 279 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 USP29Q9HBJ7 922 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 SPASTQ9UBP0 616 aa16.34■□□□□ 0.21
CLN8-206ENST00000523237 APOBEC3BQ9UH17 382 aaKnown RBP16.34■□□□□ 0.21
CLN8-206ENST00000523237 A0A1W2PQ67 120 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 CFAP69A5D8W1 941 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 TMEM110-MUSTN1A8MSY1 372 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
CLN8-206ENST00000523237 PEX11BO96011 259 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 PRKCGP05129 697 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 CLDN6P56747 220 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 TARDBPQ13148 414 aaKnown RBP eCLIP16.33■□□□□ 0.2
CLN8-206ENST00000523237 MARC1Q5VT66 337 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 ZCCHC8Q6NZY4 707 aaKnown RBP16.33■□□□□ 0.2
CLN8-206ENST00000523237 LRRC49Q8IUZ0 686 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 PHACTR4Q8IZ21 702 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 FAM71BQ8TC56 605 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 TBATAQ96M53 351 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 NUDCD1Q96RS6 583 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 SLC13A1Q9BZW2 595 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 SCUBE2Q9NQ36 999 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 NCKIPSDQ9NZQ3 722 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 FREM2Q5SZK8 3169 aa16.33■□□□□ 0.2
CLN8-206ENST00000523237 TPP1O14773 563 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 AKR1B10O60218 316 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 LRP4O75096 1905 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 SOCS5O75159 536 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 PROSCO94903 275 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 GP1BAP07359 652 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 CD48P09326 243 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 ELFN1P0C7U0 828 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 IL4RP24394 825 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 HTR1BP28222 390 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 GJC1P36383 396 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 MMP13P45452 471 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 KNTC1P50748 2209 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 INSM1Q01101 510 aaPredicted RBP16.32■□□□□ 0.2
CLN8-206ENST00000523237 SEMG2Q02383 582 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 PPARDQ03181 441 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 CYP4F3Q08477 520 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 MMRN1Q13201 1228 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 INPP5AQ14642 412 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
CLN8-206ENST00000523237 PRRT3Q5FWE3 981 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 FAXCQ5TGI0 409 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 DPPA4Q7L190 304 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 RBFAQ8N0V3 343 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 CACTIN-AS1Q8N1I8 211 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 NXPE2Q96DL1 559 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 MGME1Q9BQP7 344 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 PACSIN1Q9BY11 444 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 CLCA2Q9UQC9 943 aa16.32■□□□□ 0.2
CLN8-206ENST00000523237 TTC24A2A3L6 582 aaPredicted RBP16.31■□□□□ 0.2
CLN8-206ENST00000523237 HTRA2O43464 458 aaPredicted RBP16.31■□□□□ 0.2
CLN8-206ENST00000523237 PCCBP05166 539 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 KRT7P08729 469 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 TMEM253P0C7T8 217 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 CR2P20023 1033 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 NFKBIAP25963 317 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 BLKP51451 505 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 ARSEP51690 589 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 RALGDSQ12967 914 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 MTM1Q13496 603 aa16.31■□□□□ 0.2
CLN8-206ENST00000523237 DPYSL3Q14195 570 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms