RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
PVT1-215ENST00000522963 A0A1W2PP55 124 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 TCRBV7S3A2A0A539 114 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 FAM47DPA6NHR8 397 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 BHMG1C9JSJ3 638 aaPredicted RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 TRAFD1O14545 582 aaPredicted RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 DNALI1O14645 258 aaPredicted RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 HTRA2O43464 458 aaPredicted RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 ANXA9O76027 345 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 AP2A1O95782 977 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 UGT2B4P06133 528 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 SLC8A1P32418 973 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 PTGER3P43115 390 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 MAGEA6P43360 314 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 RPL21P46778 160 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 METAP1P53582 386 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 BCL2L1Q07817 233 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 MPP3Q13368 585 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 SPARCL1Q14515 664 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 KCNJ11Q14654 390 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 CST6Q15828 149 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 PCSK7Q16549 785 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 ANKRD22Q5VYY1 191 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 IZUMO3Q5VZ72 239 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 GDPD4Q6W3E5 623 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 KDELC2Q7Z4H8 507 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 TMIEQ8NEW7 156 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 IPMKQ8NFU5 416 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 PIP4K2CQ8TBX8 421 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 CPT1BQ92523 772 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 LRRC45Q96CN5 670 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 LRIG1Q96JA1 1093 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 KLHL32Q96NJ5 620 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 PPP1R2P1Q96PQ5 205 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 OMDQ99983 421 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 FICDQ9BVA6 458 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 RAB17Q9H0T7 212 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 RSPH9Q9H1X1 276 aaPredicted RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 SUV39H2Q9H5I1 410 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 ATP13A3Q9H7F0 1226 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 FBXL12Q9NXK8 326 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 USP36Q9P275 1121 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 NCKAP1Q9Y2A7 1128 aa12.02□□□□□ -0.49
PVT1-215ENST00000522963 AAR2Q9Y312 384 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 UTP11Q9Y3A2 253 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 ATXN2Q99700 1313 aaKnown RBP12.02□□□□□ -0.49
PVT1-215ENST00000522963 SHROOM3Q8TF72 1996 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 MEI4A8MW99 385 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 E7EVH7 732 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PLK4O00444 970 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PSMD3O43242 534 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 FZD6O60353 706 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 SOCS5O75159 536 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 RNASEH2AO75792 299 aaKnown RBP12.01□□□□□ -0.49
PVT1-215ENST00000522963 SEC31AO94979 1220 aaKnown RBP12.01□□□□□ -0.49
PVT1-215ENST00000522963 EPN2O95208 641 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PGLSO95336 258 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 AGTP01019 485 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PRLP01236 227 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PRNPP04156 253 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 APRTP07741 180 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PDHA1P08559 390 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 SERPINA4P29622 427 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 OXTRP30559 389 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 ADRA1AP35348 466 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 MPLP40238 635 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 LMAN1P49257 510 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 GUCY2DQ02846 1103 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 CDK18Q07002 472 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 GRM3Q14832 879 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 TRADDQ15628 312 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
PVT1-215ENST00000522963 LYSMD4Q5XG99 296 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 DSG4Q86SJ6 1040 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 ZSWIM9Q86XI8 627 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 RGL4Q8IZJ4 473 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 HDDC3Q8N4P3 179 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 NAT8LQ8N9F0 302 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 SEC14L1Q92503 715 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 SNX19Q92543 992 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 ARRDC3Q96B67 414 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 SNF8Q96H20 258 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 LOXL4Q96JB6 756 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 ZNF641Q96N77 438 aaPredicted RBP12.01□□□□□ -0.49
PVT1-215ENST00000522963 TRIB3Q96RU7 358 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 APOL2Q9BQE5 337 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PABPC3Q9H361 631 aaKnown RBP12.01□□□□□ -0.49
PVT1-215ENST00000522963 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 PARD6AQ9NPB6 346 aa12.01□□□□□ -0.49
PVT1-215ENST00000522963 EIF2B3Q9NR50 452 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms