RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SVOPQ8N4V2 548 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 TMEM79Q9BSE2 394 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CD248Q9HCU0 757 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 DUS2Q9NX74 493 aaKnown RBP16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 KCNK4Q9NYG8 393 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CORO2BQ9UQ03 480 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CASZ1Q86V15 1759 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 MSI1O43347 362 aaKnown RBP16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 DCXO43602 365 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 PRMT3O60678 531 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 UGT2B4P06133 528 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 FAM153BP0C7A2 387 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CRHR2Q13324 411 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 FAM153CQ494X1 144 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 CDC73Q6P1J9 531 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 KLHL5Q96PQ7 755 aa16.33■□□□□ 0.2
PCDHA3-201ENST00000522353 A0A1B0GVM2 712 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 TCAF2A6NFQ2 919 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 FAM58BPP0C7Q3 252 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 HNF4AP41235 474 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ACLYP53396 1101 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 TRIM71Q2Q1W2 868 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PPP2R2DQ66LE6 453 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 GPRIN3Q6ZVF9 776 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 RAVER1Q8IY67 606 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 HDAC7Q8WUI4 952 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 GPR88Q9GZN0 384 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CERS4Q9HA82 394 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 MYL12AP19105 171 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CLCNKBP51801 687 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 FPGSQ05932 587 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ARMCX4Q5H9R4 360 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CCDC103Q8IW40 242 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ZNF398Q8TD17 642 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 P2RY11Q96G91 374 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CXorf56Q9H5V9 222 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PPP1R11O60927 126 aaPredicted RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 NTRK1P04629 796 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 HSMCR30P0CW71 290 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 C4BPBP20851 252 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 MMP8P22894 467 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CXCR3P49682 368 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 TAF13Q15543 124 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 C16orf46Q6P387 395 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 C17orf64Q86WR6 236 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 MOSPD2Q8NHP6 518 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 RSPH9Q9H1X1 276 aaPredicted RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 REEP1Q9H902 201 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 SORCS3Q9UPU3 1222 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 TMEM191CA6NGB0 347 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ARL5CA6NH57 179 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 H0Y858 1186 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PRMT5O14744 637 aaPredicted RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CDK14O94921 469 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 DLGAP3O95886 979 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 VIPP01282 170 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ITGAXP20702 1163 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 FUT2Q10981 343 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 CENPTQ96BT3 561 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 C11orf49Q9H6J7 331 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ZFP14Q9HCL3 533 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 BCLAF3A2AJT9 711 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 ABHD2P08910 425 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 OTUD3Q5T2D3 398 aaPredicted RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 TAPT1Q6NXT6 567 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 NEK10Q6ZWH5 1172 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 KREMEN2Q8NCW0 462 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 OR6K2Q8NGY2 324 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 RDH11Q8TC12 318 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PIWIL2Q8TC59 973 aaKnown RBP16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 NDNQ99608 321 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 SLITRK2Q9H156 845 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 KLHL3Q9UH77 587 aa16.32■□□□□ 0.2
PCDHA3-201ENST00000522353 PIK3R1P27986 724 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 PSMD8P48556 350 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 TMED10P49755 219 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CCR3P51677 355 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 EVX2Q03828 476 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 GAD2Q05329 585 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 CHSY3Q70JA7 882 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 OR14C36Q8NHC7 312 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 BAP1Q92560 729 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 AGO3Q9H9G7 860 aaKnown RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 KCTD5Q9NXV2 234 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 ANGPT4Q9Y264 503 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 PCDHB1Q9Y5F3 818 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 C8AP07357 584 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 EPORP19235 508 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 MAGEA10P43363 369 aaPredicted RBP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 POLD2P49005 469 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 ILF3Q12906 894 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 TEAD4Q15561 434 aa16.31■□□□□ 0.2
PCDHA3-201ENST00000522353 STK32CQ86UX6 486 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms