RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 VAV1P15498 845 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 PPP2R1BP30154 601 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 WNT3AP56704 352 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
SYNPO-205ENST00000522122 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 TEX44Q53QW1 395 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 CROCCP3Q8IVE0 287 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 C1orf127Q8N9H9 656 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 DENND1AQ8TEH3 1009 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MYLPFQ96A32 169 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 DGCR14Q96DF8 476 aaKnown RBP13.89□□□□□ -0.19
SYNPO-205ENST00000522122 BTBD9Q96Q07 612 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 TRPC4Q9UBN4 977 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 KLHL3Q9UH77 587 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 DERAQ9Y315 318 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MYH7BA7E2Y1 1941 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MAP3K13O43283 966 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 RXRGP48443 463 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SELENOMQ8WWX9 145 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 HDAC10Q969S8 669 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 FAXDC2Q96IV6 333 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 FAM124BQ9H5Z6 455 aaPredicted RBP13.89□□□□□ -0.19
SYNPO-205ENST00000522122 AZIN1O14977 448 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MDM4O15151 490 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 TTPAP49638 278 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MAPKAPK3Q16644 382 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 EML3Q32P44 896 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 ABRAXAS1Q6UWZ7 409 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SFRP1Q8N474 314 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 BTN2A2Q8WVV5 523 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 GPR20Q99678 358 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SLC7A5P2Q9GIP4 190 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SNAP91O60641 907 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 ANXA5P08758 320 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 CDH13P55290 713 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MAXP61244 160 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 C9orf57Q5W0N0 161 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SYT12Q8IV01 421 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 PGBD3Q8N328 593 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 ADCY4Q8NFM4 1077 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 MLPHQ9BV36 600 aaPredicted RBP13.89□□□□□ -0.19
SYNPO-205ENST00000522122 CEP44Q9C0F1 390 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 REEP1Q9H902 201 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 HMG20AQ9NP66 347 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 SATB2Q9UPW6 733 aa13.89□□□□□ -0.19
SYNPO-205ENST00000522122 LAMB2P55268 1798 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 DHRS12A0PJE2 317 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 GPR15P49685 360 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SLC7A2P52569 658 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 RPL26P61254 145 aaKnown RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 JAG1P78504 1218 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 MSS51Q4VC12 460 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ARHGAP17Q68EM7 881 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SDE2Q6IQ49 451 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ZDHHC14Q8IZN3 488 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 AADATQ8N5Z0 425 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 TCF12Q99081 682 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 C6orf62Q9GZU0 229 aaPredicted RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 PNPLA3Q9NST1 481 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 KLRG2A4D1S0 409 aaPredicted RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ETS2P15036 469 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 TYMPP19971 482 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 IDH3AP50213 366 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SLC5A9Q2M3M2 681 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ZIK1Q3SY52 487 aaPredicted RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 KCTD21Q4G0X4 260 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 C16orf59Q7L2K0 433 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 HPS6Q86YV9 775 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 CDYL2Q8N8U2 506 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 STARD8Q92502 1023 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 FCRL2Q96LA5 508 aaPredicted RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 EBF3Q9H4W6 596 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ITM2BQ9Y287 266 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 BTRCQ9Y297 605 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SNX8Q9Y5X2 465 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 PRR23AA6NEV1 266 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 EPN2O95208 641 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 IL1R2P27930 398 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 WEE1P30291 646 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ICAM3P32942 547 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 MAPK11Q15759 364 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 TXNRD3NBQ6F5E7 133 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 SLC26A9Q7LBE3 791 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 TRMT11Q7Z4G4 463 aaKnown RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 C1orf50Q9BV19 199 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 C1orf21Q9H246 121 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 NXF3Q9H4D5 531 aaKnown RBP13.88□□□□□ -0.19
SYNPO-205ENST00000522122 GLOD4Q9HC38 313 aa13.88□□□□□ -0.19
SYNPO-205ENST00000522122 C3orf18Q9UK00 162 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms