RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PIAS2O75928 621 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 LCA5LO95447 670 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 C6P13671 934 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 LIG3P49916 1009 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 MAXP61244 160 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 POLR2LP62875 67 aaKnown RBP18■□□□□ 0.47
TRAPPC9-211ENST00000521700 GBE1Q04446 702 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 SLC10A2Q12908 348 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-211ENST00000521700 PDE1CQ14123 709 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-211ENST00000521700 C1QTNF7Q9BXJ2 289 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 DNAJC28Q9NX36 388 aa18■□□□□ 0.47
TRAPPC9-211ENST00000521700 C3orf70A6NLC5 250 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 C1QTNF9BB2RNN3 333 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 TRIM38O00635 465 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 HTRA2O43464 458 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 CSF2P04141 144 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 C1QTNF9P0C862 333 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 GIMD1P0DJR0 217 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 RALGDSQ12967 914 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 DNAJC3Q13217 504 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 IFI16Q16666 785 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 WSCD2Q2TBF2 565 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 CCDC157Q569K6 752 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 PAF1Q8N7H5 531 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 LRRN4Q8WUT4 740 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 SPOCK2Q92563 424 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 MAML1Q92585 1016 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 GATA6Q92908 595 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 TSGA13Q96PP4 275 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 NT5MQ9NPB1 228 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 KLF15Q9UIH9 416 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 HYOU1Q9Y4L1 999 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 PTPRBP23467 1997 aa17.99■□□□□ 0.47
TRAPPC9-211ENST00000521700 LRRD1A4D1F6 860 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 CFAP69A5D8W1 941 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 MATN3O15232 486 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 SOCS5O75159 536 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 CCNCP24863 283 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 SLC1A1P43005 524 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 YPEL5P62699 121 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 TRAF2Q12933 501 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 EIF2B5Q13144 721 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 LRRC14Q15048 493 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 AGERQ15109 404 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 IRF4Q15306 451 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 RALGPS1Q5JS13 557 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 UNQ6494/PRO21346Q6UXR6 183 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 LIPIQ6XZB0 460 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 DPPA4Q7L190 304 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 PARGQ86W56 976 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 CCDC170Q8IYT3 715 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 PDCD6IPQ8WUM4 868 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 FATE1Q969F0 183 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 TFR2Q9UP52 801 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 PCDHA13Q9Y5I0 950 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 SPEGQ15772 3267 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 PLXNB3Q9ULL4 1909 aa17.98■□□□□ 0.47
TRAPPC9-211ENST00000521700 MAP1BP46821 2468 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 A0A1W2PQ67 120 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 A8MX80 341 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 ZNF487B1APH4 448 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 TOR1BO14657 336 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 SIGLEC6O43699 453 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 NME1P15531 152 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 COMTP21964 271 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 THOP1P52888 689 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 HADHBP55084 474 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 HNRNPKP61978 463 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 ZNF211Q13398 564 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 PROX2Q3B8N5 592 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 TIGD7Q6NT04 549 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 TMPRSS7Q7RTY8 843 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 OR4C6Q8NH72 309 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 PANX2Q96RD6 677 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 SEMA3CQ99985 751 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 RBM22Q9NW64 420 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 DTLQ9NZJ0 730 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 PCDHGA1Q9Y5H4 931 aa17.97■□□□□ 0.47
TRAPPC9-211ENST00000521700 FFAR2O15552 330 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 KRT1P04264 644 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 PROS1P07225 676 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 TNNT1P13805 278 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 JUNDP17535 347 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 CKMT2P17540 419 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 MX2P20592 715 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 FECHP22830 423 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 ACADVLP49748 655 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 ITKQ08881 620 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 PTK2BQ14289 1009 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 IHHQ14623 411 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 INPP5AQ14642 412 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 SLC9A4Q6AI14 798 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 DHRS13Q6UX07 377 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 VSIG1Q86XK7 387 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 RHOT1Q8IXI2 618 aa17.96■□□□□ 0.47
TRAPPC9-211ENST00000521700 PLD5Q8N7P1 536 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms