RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 STK40Q8N2I9 435 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 TXLNBQ8N3L3 684 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 XXYLT1Q8NBI6 393 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 ZMIZ2Q8NF64 920 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 WFIKKN2Q8TEU8 576 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 HVCN1Q96D96 273 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 OSBPL9Q96SU4 736 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CMKLR1Q99788 373 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 MRPL45Q9BRJ2 306 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SYT11Q9BT88 431 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 FUT8Q9BYC5 575 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CPEB1Q9BZB8 566 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC29A3Q9BZD2 475 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 CLPBQ9H078 707 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 C17orf75Q9HAS0 396 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 DLL4Q9NR61 685 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 ST7Q9NRC1 585 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 SMARCAL1Q9NZC9 954 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 GGA2Q9UJY4 613 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 NAGPAQ9UK23 515 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 RPH3AQ9Y2J0 694 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 HYOU1Q9Y4L1 999 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 KCTD3Q9Y597 815 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 B3GALT1Q9Y5Z6 326 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 MRPS18BQ9Y676 258 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 RNF215Q9Y6U7 377 aa7.44□□□□□ -1.22
CTNNA1-227ENST00000521387 FAM221AA4D161 298 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 TTC34A8MYJ7 566 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 F8VZ95 297 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 MAPK13O15264 365 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 YY2O15391 372 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 RNASEH1O60930 286 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 BEST1O76090 585 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 FTCDO95954 541 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 PABPC1P11940 636 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 BPIP17213 487 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 TCP1P17987 556 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 TNFAIP3P21580 790 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 CXCR5P32302 372 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 NOS2P35228 1153 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 GCLMP48507 274 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 GSK3AP49840 483 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 LIG4P49917 911 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 EIF2B5Q13144 721 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 PTK2BQ14289 1009 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF284Q2VY69 593 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 SETMARQ53H47 684 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 EFHC2Q5JST6 749 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 AGBL4Q5VU57 503 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ALKBH5Q6P6C2 394 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 KLHDC10Q6PID8 442 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 INTS8Q75QN2 995 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 DPH6Q7L8W6 267 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 CBWD2Q8IUF1 395 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 RBFAQ8N0V3 343 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 CPXM2Q8N436 756 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 MMGT1Q8N4V1 131 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRC52Q8N7C0 313 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 DDI1Q8WTU0 396 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 STARD8Q92502 1023 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 SEMA4DQ92854 862 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 SAAL1Q96ER3 474 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 BICD1Q96G01 975 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ALS2CR12Q96Q35 445 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 PSMB7Q99436 277 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 IL12RB2Q99665 862 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 TRIM55Q9BYV6 548 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 UBXN6Q9BZV1 441 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ELOVL4Q9GZR5 314 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 GPN2Q9H9Y4 310 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ARFGAP3Q9NP61 516 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 MLXIPLQ9NP71 852 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 UBE2TQ9NPD8 197 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 LUC7LQ9NQ29 371 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 PILRAQ9UKJ1 303 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 INTS6Q9UL03 887 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 SARDHQ9UL12 918 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 EXOC7Q9UPT5 735 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 ATP8B3O60423 1300 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 FLNAP21333 2647 aaKnown RBP7.43□□□□□ -1.22
CTNNA1-227ENST00000521387 SPTY2D1-AS1A0A0U1RR47 76 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 POM121BA6NF01 834 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 ANKUB1A6NFN9 424 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 MAP2K7O14733 419 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 PMM2O15305 246 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 P4HA2O15460 535 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRTM2O43300 516 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 RFPL1O75677 317 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 H2AFZP0C0S5 128 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 JUNDP17535 347 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 TCN2P20062 427 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 CAPN3P20807 821 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 MZF1P28698 734 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 CORO1AP31146 461 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 NOP2P46087 812 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms