RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 HS1BP3Q53T59 392 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 KDM7AQ6ZMT4 941 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 MARCH9Q86YJ5 346 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 LRRC49Q8IUZ0 686 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 SPOCK2Q92563 424 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 CHP1Q99653 195 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 DEF6Q9H4E7 631 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 ABHD10Q9NUJ1 306 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 NLGN3Q9NZ94 848 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 ATP8A1Q9Y2Q0 1164 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 CSNK1G3Q9Y6M4 447 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 SHROOM3Q8TF72 1996 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 CELSR3Q9NYQ7 3312 aa17.18■□□□□ 0.34
SQLE-205ENST00000521232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.17■□□□□ 0.34
SQLE-205ENST00000521232 H3BM21 787 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 TAF4O00268 1085 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 APC2O95996 2303 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 TPM1P09493 284 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 TMEM253P0C7T8 217 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 ALPPL2P10696 532 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 C6P13671 934 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 LIG3P49916 1009 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 PEX5P50542 639 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 THOP1P52888 689 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 MMRN1Q13201 1228 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 DPYSL3Q14195 570 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 LRRC14Q15048 493 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 WSCD2Q2TBF2 565 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 CPNE8Q86YQ8 564 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 FAM181AQ8N9Y4 354 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 BTN2A2Q8WVV5 523 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 NUDCD1Q96RS6 583 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 DUSP23Q9BVJ7 150 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 COQ6Q9Y2Z9 468 aa17.17■□□□□ 0.34
SQLE-205ENST00000521232 A0A1W2PQ67 120 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 TTC24A2A3L6 582 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 FAM149AA5PLN7 773 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 TRABD2BA6NFA1 517 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 SRRM3A6NNA2 597 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 K7ESM1 405 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 FFAR2O15552 330 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 HTRA2O43464 458 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 AKR1B10O60218 316 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 MFAP3LO75121 409 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 PRKCGP05129 697 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 CKMT1AP12532 417 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 JUNDP17535 347 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 TAS2R40P59535 323 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 ZNF235Q14590 738 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 PAFAH1B3Q15102 231 aaKnown RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 PDK2Q15119 407 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 IRF4Q15306 451 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 PROSER1Q86XN7 944 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 CACTIN-AS1Q8N1I8 211 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 BBS5Q8N3I7 341 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 ATPAF2Q8N5M1 289 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 KCTD6Q8NC69 237 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 ZNF548Q8NEK5 533 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 PCDH19Q8TAB3 1148 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 NSMCE1Q8WV22 266 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 MGME1Q9BQP7 344 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 CCDC86Q9H6F5 360 aaKnown RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 NHEJ1Q9H9Q4 299 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 DKK4Q9UBT3 224 aa17.16■□□□□ 0.34
SQLE-205ENST00000521232 PNMA8BQ9ULN7 279 aaPredicted RBP17.16■□□□□ 0.34
SQLE-205ENST00000521232 MYLKQ15746 1914 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 ASXL3Q9C0F0 2248 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 TMEM110-MUSTN1A8MSY1 372 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 AQP9O43315 295 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 LZTS3O60299 673 aaPredicted RBP17.15■□□□□ 0.34
SQLE-205ENST00000521232 SOCS5O75159 536 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 NEBLO76041 1014 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 KRT7P08729 469 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 JUPP14923 745 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 MAN1A1P33908 653 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 DAB2P98082 770 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 E2F1Q01094 437 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 SEMG2Q02383 582 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 RALGDSQ12967 914 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 ANKRD20A8PQ5CZ79 823 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 RALGPS1Q5JS13 557 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 MARC1Q5VT66 337 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 NCBP2-AS2Q69YL0 99 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 LIPIQ6XZB0 460 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 MACC1Q6ZN28 852 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 DPPA4Q7L190 304 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 MAP7D3Q8IWC1 876 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 TEX26Q8N6G2 289 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 PDCD7Q8N8D1 485 aaKnown RBP17.15■□□□□ 0.34
SQLE-205ENST00000521232 SLC35G2Q8TBE7 412 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 RFFLQ8WZ73 363 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 TBATAQ96M53 351 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 ZNF670Q9BS34 389 aa17.15■□□□□ 0.34
SQLE-205ENST00000521232 USP29Q9HBJ7 922 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms