RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CMTM5Q96DZ9 223 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
SPARC-202ENST00000520687 ZNF778Q96MU6 729 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 TCF12Q99081 682 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 MGME1Q9BQP7 344 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 NMUR2Q9GZQ4 415 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 CDH19Q9H159 772 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 CRISPLD1Q9H336 500 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 CCSER2Q9H7U1 834 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 PDFQ9HBH1 243 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 ARL8BQ9NVJ2 186 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 UBA2Q9UBT2 640 aaPredicted RBP10.02□□□□□ -0.81
SPARC-202ENST00000520687 STOML2Q9UJZ1 356 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 VPS9D1Q9Y2B5 631 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 STK38LQ9Y2H1 464 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 TBC1D30Q9Y2I9 924 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 SCN5AQ14524 2016 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 CACNA1BQ00975 2339 aa10.02□□□□□ -0.81
SPARC-202ENST00000520687 CXorf51AA0A1B0GTR3 108 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 A0A1B0GVM2 712 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TCAF2A6NFQ2 919 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TARM1B6A8C7 271 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 HGSO14964 777 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 KIAA0355O15063 1070 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PFDN6O15212 129 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 GSC2O15499 205 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CRTAMO95727 393 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 HMBSP08397 361 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 HMGA1P17096 107 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 PFKLP17858 780 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 OGNP20774 298 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 ATP5F1P24539 256 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 GABRB3P28472 473 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PPM1AP35813 382 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 SLC1A2P43004 574 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 EPHB3P54753 998 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PRAMEP78395 509 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 DSC2Q02487 901 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 RCN2Q14257 317 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PCSK7Q16549 785 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CES4AQ5XG92 561 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 LRRC8EQ6NSJ5 796 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 DDX53Q86TM3 631 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 SLC22A9Q8IVM8 553 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 MFN1Q8IWA4 741 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TCEAL8Q8IYN2 117 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 GJD3Q8N144 294 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 SLC39A11Q8N1S5 342 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PLD6Q8N2A8 252 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 AFAP1L2Q8N4X5 818 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TEX9Q8N6V9 391 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 USP13Q92995 863 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TMEM169Q96HH4 297 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 ELMO2Q96JJ3 720 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 SCYL1Q96KG9 808 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CNDP1Q96KN2 507 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 B3GALT6Q96L58 329 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 NUDCD1Q96RS6 583 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 SORT1Q99523 831 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 SEMA3CQ99985 751 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 C19orf43Q9BQ61 176 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CCDC106Q9BWC9 280 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 CD320Q9NPF0 282 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 FBXO6Q9NRD1 293 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 NOP53Q9NZM5 478 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 IL1RAPL1Q9NZN1 696 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 VWA8A3KMH1 1905 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 PKD1L2Q7Z442 2459 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 NT5C1B-RDH14C9J2C7 533 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 F8W8V4 182 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 H3BNC9 293 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 HDAC3O15379 428 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 COCHO43405 550 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 ITM2AO43736 263 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 RPP40O75818 363 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 SOAT2O75908 522 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 GLP2RO95838 553 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 LTA4HP09960 611 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 ATXN1LP0C7T5 689 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 POU3F3P20264 500 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 IDH3AP50213 366 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 RPL14P50914 215 aaKnown RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 CCNG1P51959 295 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 RAP1GDS1P52306 607 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TLE2Q04725 743 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 CTBP1Q13363 440 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 ACAP2Q15057 778 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 HSF5Q4G112 596 aaPredicted RBP10.01□□□□□ -0.81
SPARC-202ENST00000520687 SH2D4BQ5SQS7 431 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 C6orf163Q5TEZ5 329 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 IL31Q6EBC2 164 aa10.01□□□□□ -0.81
SPARC-202ENST00000520687 FAM45BPQ6NSW5 357 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms