RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 KCNE2Q9Y6J6 123 aa4.27□□□□□ -1.73
SQLE-204ENST00000520493 A0A1W2PPC1 479 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 VILLO15195 856 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 ADAP00813 363 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 GALTP07902 379 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 TGFB3P10600 412 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 NFKBIAP25963 317 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 CHRNA5P30532 468 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 P2RX3P56373 397 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 NLRP5P59047 1200 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 IFI35P80217 286 aaPredicted RBP4.26□□□□□ -1.73
SQLE-204ENST00000520493 GOLGA8DPQ0D2H9 430 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 DPCR1Q3MIW9 517 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 PIK3CD-AS1Q5SR53 167 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 TMEM154Q6P9G4 183 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 PELI3Q8N2H9 469 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 TTC39CQ8N584 583 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 KCNG4Q8TDN1 519 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 SMARCE1Q969G3 411 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 CALML4Q96GE6 196 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 RADILQ96JH8 1075 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 KLHL15Q96M94 604 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 H2AFJQ9BTM1 129 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 IFT27Q9BW83 186 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 SF3B5Q9BWJ5 86 aaKnown RBP4.26□□□□□ -1.73
SQLE-204ENST00000520493 TTYH1Q9H313 450 aaPredicted RBP4.26□□□□□ -1.73
SQLE-204ENST00000520493 KIAA1456Q9P272 454 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 MORF4L1Q9UBU8 362 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 HSPB7Q9UBY9 170 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 ICKQ9UPZ9 632 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 MST1RQ04912 1400 aa4.26□□□□□ -1.73
SQLE-204ENST00000520493 A0A0G2JK05 382 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 MYO1GB0I1T2 1018 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 PTGES3LE9PB15 166 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 SCAMP1O15126 338 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 PGM3O95394 542 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 APOA4P06727 396 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 HEXAP06865 529 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 FGF2P09038 288 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 CHRNB1P11230 501 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 PTPN2P17706 415 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ICAM3P32942 547 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 NNMTP40261 264 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ZBTB16Q05516 673 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 TMEM115Q12893 351 aaPredicted RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 EDRF1Q3B7T1 1238 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ZNF667Q5HYK9 610 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 HECTD3Q5T447 861 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 UBAP2Q5T6F2 1119 aaKnown RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 FAM171A1Q5VUB5 890 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 TXNDC8Q6A555 127 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 NAA16Q6N069 864 aaPredicted RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 RPUSD3Q6P087 351 aaKnown RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 GSTA5Q7RTV2 222 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 SLC46A3Q7Z3Q1 461 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 RNF144BQ7Z419 303 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 SZRD1Q7Z422 152 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ARHGAP12Q8IWW6 846 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ADGRF2Q8IZF7 708 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 TMEM116Q8NCL8 245 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 DNAAF1Q8NEP3 725 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 TMEM174Q8WUU8 243 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 EME1Q96AY2 570 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 INTS12Q96CB8 462 aaKnown RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 YME1L1Q96TA2 773 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 PIP5K1AQ99755 562 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 LBHD1Q9BQE6 289 aaPredicted RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 ZPBPQ9BS86 351 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 BABAM1Q9NWV8 329 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 ZNF215Q9UL58 517 aaPredicted RBP4.25□□□□□ -1.73
SQLE-204ENST00000520493 A4GNTQ9UNA3 340 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 PCDHGB5Q9Y5G0 923 aa4.25□□□□□ -1.73
SQLE-204ENST00000520493 LRRC53A6NM62 1247 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 H0YGN5 161 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 MSI1O43347 362 aaKnown RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 PAGE4O60829 102 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 ATG13O75143 517 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 DDAH2O95865 285 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 ACSL1P33121 698 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 CYP2J2P51589 502 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 NIPAL4Q0D2K0 466 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 STK4Q13043 487 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 GALNT3Q14435 633 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 PLCB4Q15147 1175 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 RASA2Q15283 850 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 SHBQ15464 509 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 HIST2H2ACQ16777 129 aaPredicted RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 HMBOX1Q6NT76 420 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 FAM160B2Q86V87 743 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 IGFN1Q86VF2 1251 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 TMC8Q8IU68 726 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 TICAM1Q8IUC6 712 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 ADHFE1Q8IWW8 467 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 TAGAPQ8N103 731 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 FBXL14Q8N1E6 418 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 TTC30BQ8N4P2 665 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms