RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ARHGEF26Q96DR7 871 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 ZC3HAV1LQ96H79 300 aaKnown RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 CLMNQ96JQ2 1002 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 CNDP2Q96KP4 475 aaKnown RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 PDZD7Q9H5P4 517 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 RANGRFQ9HD47 186 aaPredicted RBP7.68□□□□□ -1.18
LSM1-202ENST00000520286 FAM169AQ9Y6X4 670 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 BCORL1Q5H9F3 1711 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 PTPRTO14522 1441 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 RAPGEF2Q9Y4G8 1499 aa7.68□□□□□ -1.18
LSM1-202ENST00000520286 SPATA31D1Q6ZQQ2 1576 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 HSPB2A8KAH6 182 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 CDRT15L2A8MXV6 281 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 H7C0S8 307 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 MASP2O00187 686 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 UNGP13051 313 aaPredicted RBP7.67□□□□□ -1.18
LSM1-202ENST00000520286 SELLP14151 372 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 BMP5P22003 454 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 SLC15A1P46059 708 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 GPR12P47775 334 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 HSD17B4P51659 736 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 CLCN5P51795 746 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ZNF268Q14587 947 aaPredicted RBP7.67□□□□□ -1.18
LSM1-202ENST00000520286 HSPB2Q16082 182 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ENTPD8Q5MY95 495 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 TTC39AQ5SRH9 613 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ISM2Q6H9L7 571 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 CES5AQ6NT32 575 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ARHGEF25Q86VW2 580 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 LINC00346Q8IVM7 164 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 DDIASQ8IXT1 998 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 NKAIN3Q8N8D7 197 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 C8orf58Q8NAV2 365 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 SGCDQ92629 289 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 RNF183Q96D59 192 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 MXRA8Q9BRK3 442 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 SRSF8Q9BRL6 282 aaKnown RBP7.67□□□□□ -1.18
LSM1-202ENST00000520286 SCNM1Q9BWG6 230 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 TKTL2Q9H0I9 626 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 BPIFA1Q9NP55 256 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 SEMA4GQ9NTN9 838 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 GIMAP4Q9NUV9 329 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ZHX1Q9UKY1 873 aaPredicted RBP7.67□□□□□ -1.18
LSM1-202ENST00000520286 LSM4Q9Y4Z0 139 aaKnown RBP7.67□□□□□ -1.18
LSM1-202ENST00000520286 FHOD3Q2V2M9 1422 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 ABCA8O94911 1581 aa7.67□□□□□ -1.18
LSM1-202ENST00000520286 A0A087X1B8 175 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 FAM237AA0A1B0GTK4 181 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 C17orf102A2RUQ5 167 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 TUBBP07437 444 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 PIK3CAP42336 1068 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 GALCP54803 685 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 MFAP4P55083 255 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 RRP1P56182 461 aaKnown RBP7.66□□□□□ -1.18
LSM1-202ENST00000520286 STIM1Q13586 685 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 FCRLBQ6BAA4 426 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 FAM57BQ71RH2 274 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 FAM185AQ8N0U4 392 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 CCDC34Q96HJ3 373 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 TMEM68Q96MH6 324 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 APOL6Q9BWW8 343 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 SIL1Q9H173 461 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 CCDC177Q9NQR7 707 aaPredicted RBP7.66□□□□□ -1.18
LSM1-202ENST00000520286 OGFRQ9NZT2 677 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 RAP2CQ9Y3L5 183 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 KIAA0556O60303 1618 aa7.66□□□□□ -1.18
LSM1-202ENST00000520286 HCRTR2O43614 444 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 HS6ST1O60243 411 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 DENND4BO75064 1496 aaPredicted RBP7.65□□□□□ -1.18
LSM1-202ENST00000520286 ATP2C2O75185 946 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 CSPG5O95196 566 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 ZNF182P17025 639 aaPredicted RBP7.65□□□□□ -1.18
LSM1-202ENST00000520286 TMEM11P17152 192 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 SRD5A1P18405 259 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 EPHB2P29323 1055 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 LMAN1P49257 510 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 CAMPP49913 170 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 PMS2P54278 862 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 IKQ13123 557 aaPredicted RBP7.65□□□□□ -1.18
LSM1-202ENST00000520286 PCLAFQ15004 111 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 SHBQ15464 509 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 TCTN1Q2MV58 587 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 LCTLQ6UWM7 567 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 OLFML1Q6UWY5 402 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 AKNAQ7Z591 1439 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 ZDHHC23Q8IYP9 409 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 SLC25A41Q8N5S1 370 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 LRRC57Q8N9N7 239 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 GJC3Q8NFK1 279 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 GPR150Q8NGU9 434 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 PRPF31Q8WWY3 499 aaKnown RBP7.65□□□□□ -1.18
LSM1-202ENST00000520286 ELMOD3Q96FG2 381 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 OR10A4Q9H209 315 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 PAPOLBQ9NRJ5 636 aaKnown RBP7.65□□□□□ -1.18
LSM1-202ENST00000520286 SEL1LQ9UBV2 794 aa7.65□□□□□ -1.18
LSM1-202ENST00000520286 GOLGA3Q08378 1498 aa7.64□□□□□ -1.19
LSM1-202ENST00000520286 ZNF335Q9H4Z2 1342 aaPredicted RBP7.64□□□□□ -1.19
LSM1-202ENST00000520286 FANCIQ9NVI1 1328 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms