RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RGL4Q8IZJ4 473 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 RYBPQ8N488 228 aaPredicted RBP11.61□□□□□ -0.55
SPIDR-212ENST00000519661 DEFB119Q8N690 84 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 UBL4BQ8N7F7 174 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 TRIM58Q8NG06 486 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 PIH1D2Q8WWB5 315 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 P3H4Q92791 437 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 SKA1Q96BD8 255 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 RMDN1Q96DB5 314 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 SLC6A18Q96N87 628 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 TRIB3Q96RU7 358 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 TDRD1Q9BXT4 1180 aaKnown RBP11.61□□□□□ -0.55
SPIDR-212ENST00000519661 SLC25A51Q9H1U9 297 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 RBM22Q9NW64 420 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPIDR-212ENST00000519661 PHTF1Q9UMS5 762 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 ANKRD6Q9Y2G4 727 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 PPP2R2CQ9Y2T4 447 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
SPIDR-212ENST00000519661 KCNK1O00180 336 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 TLR4O00206 839 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 WNT9AO14904 365 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 TJP3O95049 919 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 CER1O95813 267 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 EPOP01588 193 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 CFIP05156 583 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 HOXC4P09017 264 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 GM2AP17900 193 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 NFKBIAP25963 317 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 PTPN3P26045 913 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 CSNK1EP49674 416 aaKnown RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 NIPAL4Q0D2K0 466 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 KIF19Q2TAC6 998 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 AASDHQ4L235 1098 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 ODF2Q5BJF6 829 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 SEL1L3Q68CR1 1132 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 ERAP2Q6P179 960 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 NPNTQ6UXI9 565 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 GCNT7Q6ZNI0 430 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 OXR1Q8N573 874 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 MINDY1Q8N5J2 469 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 BAHD1Q8TBE0 780 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 TFB1MQ8WVM0 346 aaKnown RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 RTP4Q96DX8 246 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 SERAC1Q96JX3 654 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 TBATAQ96M53 351 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 FRMD8P1Q9BZ68 369 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-212ENST00000519661 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 DNPEPQ9ULA0 475 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
SPIDR-212ENST00000519661 A0A0J9YYE9 177 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 A0A1B0GTQ1 180 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 A0A1B0GVT2 93 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 MAP3K6O95382 1288 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 JCHAINP01591 159 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 TRBC1P01850 177 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CD59P13987 128 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ZNF30P17039 623 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CA4P22748 312 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 AKT2P31751 481 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CETN2P41208 172 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 YPEL5P62699 121 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 SKOR1P84550 965 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 RSPO4Q2I0M5 234 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 LIPIQ6XZB0 460 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 TTC13Q8NBP0 860 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 TP53I13Q8NBR0 393 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CCNYQ8ND76 341 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 SLC35B2Q8TB61 432 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ACTL9Q8TC94 416 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 BMFQ96LC9 184 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 COQ10AQ96MF6 247 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 C19orf43Q9BQ61 176 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 USP29Q9HBJ7 922 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 NFKBIL1Q9UBC1 381 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 SAE1Q9UBE0 346 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 TRHDEQ9UKU6 1024 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CDV3Q9UKY7 258 aaKnown RBP11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ITM2BQ9Y287 266 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 PCDHGC4Q9Y5F7 938 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 RAI2Q9Y5P3 530 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 CABIN1Q9Y6J0 2220 aa11.59□□□□□ -0.55
SPIDR-212ENST00000519661 ASCC3Q8N3C0 2202 aaKnown RBP11.58□□□□□ -0.56
SPIDR-212ENST00000519661 PLXNA2O75051 1894 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 SPTY2D1-AS1A0A0U1RR47 76 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 IGLON5A6NGN9 336 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 FAM47DPA6NHR8 397 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 A6NNZ2 444 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 RAD51BO15315 384 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 CBFA2T3O75081 653 aa11.58□□□□□ -0.56
SPIDR-212ENST00000519661 TM7SF2O76062 418 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms