RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 GATAD2AQ86YP4 633 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 SLC22A15Q8IZD6 547 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 OR5H6Q8NGV6 325 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 DPF3Q92784 378 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 BCL7BQ9BQE9 202 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 MXRA8Q9BRK3 442 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
PABPC1-208ENST00000519004 AMNQ9BXJ7 453 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ING2Q9H160 280 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ADNPQ9H2P0 1102 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 SYTL2Q9HCH5 934 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
PABPC1-208ENST00000519004 ABI2Q9NYB9 513 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-208ENST00000519004 SLCO1B7G3V0H7 640 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 SDHDO14521 159 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ENPP3O14638 875 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TSPAN1O60635 241 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 NDUFS2O75306 463 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 MAGP20916 626 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 PCMT1P22061 227 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CES1P23141 567 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CCNA1P78396 465 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 BNIP2Q12982 314 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ZACNQ401N2 412 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CLEC14AQ86T13 490 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 DCLK2Q8N568 766 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 WDTC1Q8N5D0 677 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 FAM83FQ8NEG4 500 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-208ENST00000519004 LRRN4Q8WUT4 740 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CITED4Q96RK1 184 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 SLIRPQ9GZT3 109 aaKnown RBP13.63□□□□□ -0.23
PABPC1-208ENST00000519004 IL22Q9GZX6 179 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 MIR1-1HGQ9H1L0 117 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 NARFLQ9H6Q4 476 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 NECTIN3Q9NQS3 549 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CENPXA8MT69 81 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TCP10L2B9ZVM9 353 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 SHOXO15266 292 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ALBP02768 609 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ARSAP15289 507 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TPSB2P20231 275 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 LRPAP1P30533 357 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 RFC2P35250 354 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 HADHAP40939 763 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 WNT7BP56706 349 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 LSM3P62310 102 aaKnown RBP13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CRADDP78560 199 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 MAPRE2Q15555 327 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TPSAB1Q15661 275 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 YIF1BQ5BJH7 314 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ZBTB41Q5SVQ8 909 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TUBA3EQ6PEY2 450 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 PAGE2Q7Z2X7 111 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 TRPV3Q8NET8 790 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 GLMNQ92990 594 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CPXM1Q96SM3 734 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 EPS8L2Q9H6S3 715 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 PAQR5Q9NXK6 330 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-208ENST00000519004 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
PABPC1-208ENST00000519004 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TMEM233B4DJY2 109 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 DNAJB5O75953 348 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 LSM8O95777 96 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 C4BPAP04003 597 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 GSTM1P09488 218 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 MIPP30301 263 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 GRK3P35626 688 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 GARSP41250 739 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 HTR3AP46098 478 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 RARRES1P49788 294 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF132P52740 706 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 SIK1P57059 783 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 VBP1P61758 197 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 FASTKQ14296 549 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ZIK1Q3SY52 487 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 AGKQ53H12 422 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 FAM205BPQ63HN1 556 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ZNF544Q6NX49 715 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 HACD2Q6Y1H2 254 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 GDPD3Q7L5L3 318 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 SVOPQ8N4V2 548 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 AFAP1L2Q8N4X5 818 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 HDAC2Q92769 488 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ZFYVE19Q96K21 471 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 UBXN10Q96LJ8 280 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 NMRAL1Q9HBL8 299 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 ZMAT5Q9UDW3 170 aaKnown RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 DNMT3LQ9UJW3 386 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 SLX4Q8IY92 1834 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TTC24A2A3L6 582 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-208ENST00000519004 C12orf71A8MTZ7 269 aa13.62□□□□□ -0.23
PABPC1-208ENST00000519004 TRIM77I1YAP6 450 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms