RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CBX1P83916 185 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 NHLH2Q02577 135 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 PPATQ06203 517 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 CYP24A1Q07973 514 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 KCTD2Q14681 263 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 STXBP2Q15833 593 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 PTCHD3Q3KNS1 767 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 XKR3Q5GH77 459 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 BEND6Q5SZJ8 279 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 MAP3K21Q5TCX8 1036 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 AGAP9Q5VTM2 703 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 RGS7BPQ6MZT1 257 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TMCO3Q6UWJ1 677 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 SEPT14Q6ZU15 432 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TRMT1LQ7Z2T5 733 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TAX1BP1Q86VP1 789 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 ERO1BQ86YB8 467 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 PALB2Q86YC2 1186 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 KRT222Q8N1A0 295 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 RNF10Q8N5U6 811 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 XXYLT1Q8NBI6 393 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 MCPH1Q8NEM0 835 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 ABHD5Q8WTS1 349 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 SLC20A1Q8WUM9 679 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TMEM171Q8WVE6 324 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 CPT1BQ92523 772 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 KIFAP3Q92845 792 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 SEMA4DQ92854 862 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 HIST1H2AAQ96QV6 131 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TWNKQ96RR1 684 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 NEU1Q99519 415 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 RHOXF2Q9BQY4 288 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 SYT17Q9BSW7 474 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 UBXN6Q9BZV1 441 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TWSG1Q9GZX9 223 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TMEM117Q9H0C3 514 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 MEGF9Q9H1U4 602 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 GBA2Q9HCG7 927 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 G6PC2Q9NQR9 355 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 ARGLU1Q9NWB6 273 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 TAS2R14Q9NYV8 317 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 VSX1Q9NZR4 365 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 OGFRQ9NZT2 677 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 FBXO40Q9UH90 709 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 VPS51Q9UID3 782 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 NDRG4Q9ULP0 352 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 NEU2Q9Y3R4 380 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 JRKLQ9Y4A0 524 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 USP15Q9Y4E8 981 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 RPS6KL1Q9Y6S9 549 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 KIAA1217Q5T5P2 1943 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 DOCK5Q9H7D0 1870 aa5.03□□□□□ -1.6
CTNNA1-212ENST00000518919 POLR2AP24928 1970 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 MYH11P35749 1972 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A9PA6NNJ1 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 E7ENX8 843 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 E7EVH7 732 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 MAP2K7O14733 419 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TIMM44O43615 452 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 NOBOXO60393 691 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 DKC1O60832 514 aaKnown RBP eCLIP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 SUN1O94901 812 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PIGRP01833 764 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 KRT1P04264 644 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PGK2P07205 417 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 C1QTNF9P0C862 333 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PRLRP16471 622 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TCP1P17987 556 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 GLRA2P23416 452 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 RBL1P28749 1068 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 SERPINA4P29622 427 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CD6P30203 668 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 PRKAR1BP31321 381 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CXCR5P32302 372 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 EPHX2P34913 555 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ARL2P36404 184 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 NDUFV1P49821 464 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ANXA11P50995 505 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CCR5P51681 352 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 EPHB4P54760 987 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TAP2Q03519 686 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ENPEPQ07075 957 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 E2F2Q14209 437 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 CSHL1Q14406 222 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TOMM20Q15388 145 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 KCNA10Q16322 511 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 SNRNP35Q16560 246 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 TRIM60Q495X7 471 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 C10orf76Q5T2E6 689 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 WDR93Q6P2C0 686 aa5.02□□□□□ -1.61
CTNNA1-212ENST00000518919 ALKBH5Q6P6C2 394 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms