RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CDC25BP30305 580 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 SLC1A1P43005 524 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 RXRGP48443 463 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 LIG3P49916 1009 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 RENBPP51606 427 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 SGCGQ13326 291 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 FZD2Q14332 565 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 GRM3Q14832 879 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 WSCD2Q2TBF2 565 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 RFX6Q8HWS3 928 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 HCAR2Q8TDS4 363 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 CXorf40AQ8TE69 158 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 TSGA13Q96PP4 275 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 LENG8Q96PV6 779 aaPredicted RBP13.4□□□□□ -0.26
VEGFA-219ENST00000518824 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 HERPUD2Q9BSE4 406 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 ERVMER34-1Q9H9K5 563 aa13.4□□□□□ -0.26
VEGFA-219ENST00000518824 A0A0A6YYK5 440 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 A6NNZ2 444 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 APOL1O14791 398 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 HYAL3O43820 417 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 GIMD1P0DJR0 217 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 PECAM1P16284 738 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CCNCP24863 283 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CDKN2BP42772 138 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 PFN3P60673 137 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 AP1S1P61966 158 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 OVGP1Q12889 678 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 EIF2B5Q13144 721 aaKnown RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 HNRNPDQ14103 355 aaKnown RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 IRF4Q15306 451 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 TAZQ16635 292 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 IFI16Q16666 785 aaKnown RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 KAZNQ674X7 775 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 KCTD16Q68DU8 428 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 MARCH9Q86YJ5 346 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 SLC25A45Q8N413 288 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CHCHD4Q8N4Q1 142 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 EID2Q8N6I1 236 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CNTD1Q8N815 330 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 CCNYQ8ND76 341 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 ARRDC2Q8TBH0 407 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 ASB12Q8WXK4 309 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 HDAC11Q96DB2 347 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 TCEAL2Q9H3H9 227 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-219ENST00000518824 RBM22Q9NW64 420 aaKnown RBP eCLIP13.39□□□□□ -0.274e-11■■■■□ 26.1
VEGFA-219ENST00000518824 B4GALT6Q9UBX8 382 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 PCDHB9Q9Y5E1 797 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 SPEGQ15772 3267 aa13.39□□□□□ -0.27
VEGFA-219ENST00000518824 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 TRIM38O00635 465 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 JCHAINP01591 159 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 ITGAVP06756 1048 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 ALPIP09923 528 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 FTH1P19P0C7X4 201 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 CCNB1P14635 433 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 CTPS1P17812 591 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 LHCGRP22888 699 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PPIDQ08752 370 aaKnown RBP13.38□□□□□ -0.27
VEGFA-219ENST00000518824 ITKQ08881 620 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 ELP6Q0PNE2 266 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 DNAJC3Q13217 504 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PDE1CQ14123 709 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-219ENST00000518824 SUZ12Q15022 739 aaKnown RBP13.38□□□□□ -0.27
VEGFA-219ENST00000518824 C11orf63Q6NUN7 778 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 RFLNAQ6ZTI6 216 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 DPPA4Q7L190 304 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 TSPAN33Q86UF1 283 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 CCDC13Q8IYE1 715 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 NSMCE1Q8WV22 266 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PIH1D2Q8WWB5 315 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 OLFM3Q96PB7 478 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 DDX56Q9NY93 547 aaKnown RBP13.38□□□□□ -0.27
VEGFA-219ENST00000518824 TTLL3Q9Y4R7 772 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 RAI2Q9Y5P3 530 aa13.38□□□□□ -0.27
VEGFA-219ENST00000518824 PLXNB3Q9ULL4 1909 aa13.37□□□□□ -0.27
VEGFA-219ENST00000518824 SPTY2D1-AS1A0A0U1RR47 76 aa13.37□□□□□ -0.27
VEGFA-219ENST00000518824 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-219ENST00000518824 GRID2IPA4D2P6 1211 aa13.37□□□□□ -0.27
VEGFA-219ENST00000518824 NPIPB15A6NHN6 443 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-219ENST00000518824 FPGTO14772 594 aa13.37□□□□□ -0.27
VEGFA-219ENST00000518824 SCAMP1O15126 338 aa13.37□□□□□ -0.27
VEGFA-219ENST00000518824 PJA2O43164 708 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms