RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 HSPA1BP0DMV9 641 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 EDN2P20800 178 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 TNFAIP3P21580 790 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 CHMP24386 653 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 CDAP32320 146 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 MAN1A1P33908 653 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 BSGP35613 385 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 HARS2P49590 506 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 RAD23BP54727 409 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ITGADQ13349 1161 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 MYBPC2Q14324 1141 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 HNF4GQ14541 408 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ARHGEF6Q15052 776 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 PPP2R5BQ15173 497 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 TDRD12Q587J7 1177 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 EFHC1Q5JVL4 640 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 C8orf82Q6P1X6 216 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 NEK10Q6ZWH5 1172 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 DHX40Q8IX18 779 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ZCCHC9Q8N567 271 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 PARP16Q8N5Y8 322 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 CADM4Q8NFZ8 388 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ASB5Q8WWX0 329 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 TRIB2Q92519 343 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 SKA1Q96BD8 255 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 FAM149B1Q96BN6 582 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ZBTB9Q96C00 473 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 SLITRK1Q96PX8 696 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 BBS4Q96RK4 519 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 MMTAG2Q9BU76 263 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 STRA6Q9BX79 667 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 MRPL44Q9H9J2 332 aaKnown RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 ASAH2Q9NR71 780 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 TMEM51Q9NW97 253 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 INSL5Q9Y5Q6 135 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 PTGDR2Q9Y5Y4 395 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 A0A1W2PRG0 241 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CLEC18AA5D8T8 446 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 FAM90A8PA6NJQ4 464 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 RGS11O94810 467 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CCNDBP1O95273 360 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 NTN1O95631 604 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 DDX58O95786 925 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 GLUD1P00367 558 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 FAM90A13PP0C7W8 464 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 FAM90A24PP0C7X0 464 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 ETFAP13804 333 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 SHMT1P34896 483 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 RXRGP48443 463 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 GLUD2P49448 558 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 FOXG1P55316 489 aaPredicted RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 GRIK3Q13003 919 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CTTNQ14247 550 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 SGO1Q5FBB7 561 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 PLEKHA7Q6IQ23 1121 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 KLHL24Q6TFL4 600 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CCDC129Q6ZRS4 1044 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 LINGO2Q7L985 606 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 BHLHA9Q7RTU4 235 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 MAATS1Q7Z4T9 603 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CCDC105Q8IYK2 499 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 AADATQ8N5Z0 425 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 MIGA1Q8NAN2 632 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 SCCPDHQ8NBX0 429 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CLEC18CQ8NCF0 446 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 B4GALNT2Q8NHY0 566 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 OIT3Q8WWZ8 545 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 LRFN5Q96NI6 719 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 NTPCRQ9BSD7 190 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 NUF2Q9BZD4 464 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 EBF3Q9H4W6 596 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 MAGEE1Q9HCI5 957 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 BPIFA1Q9NP55 256 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 PCDHB16Q9NRJ7 776 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 OR6C3Q9NZP0 311 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 CTNNAL1Q9UBT7 734 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 WNT16Q9UBV4 365 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 AASSQ9UDR5 926 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 HAO1Q9UJM8 370 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 INTS6Q9UL03 887 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 AGO1Q9UL18 857 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 MYO6Q9UM54 1294 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 PAM16Q9Y3D7 125 aa3.8□□□□□ -1.8
VPS13B-207ENST00000518569 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
VPS13B-207ENST00000518569 TGFB1I1O43294 461 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 BAIAP3O94812 1187 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 VNN2O95498 520 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 ICAM3P32942 547 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 OLR1P78380 273 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 EGR4Q05215 589 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 CRYZQ08257 329 aaKnown RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 OLIG2Q13516 323 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 NEDD9Q14511 834 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 TBCEQ15813 527 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 KRT24Q2M2I5 525 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 LRRC8EQ6NSJ5 796 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 GSTA5Q7RTV2 222 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 NOXA1Q86UR1 476 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms