RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 QKIQ96PU8 341 aaKnown RBP eCLIP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 GTPBP2Q9BX10 602 aaKnown RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 C1QTNF2Q9BXJ5 285 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 SLC17A9Q9BYT1 436 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 TMEM9BQ9NQ34 198 aa22.15■■□□□ 1.14
VEGFA-217ENST00000518538 CDV3Q9UKY7 258 aaKnown RBP22.15■■□□□ 1.14
VEGFA-217ENST00000518538 ANKRD36A6QL64 1941 aa22.14■■□□□ 1.14
VEGFA-217ENST00000518538 A0A1W2PR77 199 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 IGLON5A6NGN9 336 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 PGLSO95336 258 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 CPP00450 1065 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 AKT2P31751 481 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 MMP12P39900 470 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 PI4KAP42356 2102 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 BNC1Q01954 994 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 NIPAL4Q0D2K0 466 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 SGCGQ13326 291 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 RSPO4Q2I0M5 234 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-217ENST00000518538 ARMC12Q5T9G4 340 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 MEI1Q5TIA1 1274 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 IL27RAQ6UWB1 636 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.14■■□□□ 1.13
VEGFA-217ENST00000518538 ACTL9Q8TC94 416 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 CEP41Q9BYV8 373 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 ANKRD6Q9Y2G4 727 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 PCDHB9Q9Y5E1 797 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 RAI2Q9Y5P3 530 aa22.14■■□□□ 1.13
VEGFA-217ENST00000518538 MMP20O60882 483 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 WNT1P04628 370 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 PRKCGP05129 697 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 PTPN3P26045 913 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 C21orf59P57076 290 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 OTUD4Q01804 1114 aaKnown RBP22.13■■□□□ 1.13
VEGFA-217ENST00000518538 IHHQ14623 411 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 STAT4Q14765 748 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 TEX44Q53QW1 395 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 IQCHQ86VS3 1027 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 MINDY1Q8N5J2 469 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 MFSD2AQ8NA29 543 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 AGAP3Q96P47 875 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 LENG8Q96PV6 779 aaPredicted RBP22.13■■□□□ 1.13
VEGFA-217ENST00000518538 WRAP53Q9BUR4 548 aaKnown RBP22.13■■□□□ 1.13
VEGFA-217ENST00000518538 FZD3Q9NPG1 666 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 PHTF1Q9UMS5 762 aa22.13■■□□□ 1.13
VEGFA-217ENST00000518538 GOLGA6L9A6NEM1 432 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 C4orf47A7E2U8 309 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 SLC30A4O14863 429 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 FZD6O60353 706 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 TM7SF2O76062 418 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 PAK4O96013 591 aaPredicted RBP22.12■■□□□ 1.13
VEGFA-217ENST00000518538 CA4P22748 312 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 NFKBIAP25963 317 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 FAM193AP78312 1265 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 OVGP1Q12889 678 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 RALGDSQ12967 914 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 RPS6KA1Q15418 735 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 KIF19Q2TAC6 998 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 DPPA4Q7L190 304 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 VAT1Q99536 393 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 MYOCQ99972 504 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 TDRD1Q9BXT4 1180 aaKnown RBP22.12■■□□□ 1.13
VEGFA-217ENST00000518538 CA5BQ9Y2D0 317 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 SNX11Q9Y5W9 270 aa22.12■■□□□ 1.13
VEGFA-217ENST00000518538 CFAP69A5D8W1 941 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 H7C0C1 242 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 CER1O95813 267 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 MMP2P08253 660 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 CD86P42081 329 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 ATP5OP48047 213 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 SKOR1P84550 965 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 WASHC5Q12768 1159 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 KLF1Q13351 362 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-217ENST00000518538 SEL1L2Q5TEA6 688 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 TTC13Q8NBP0 860 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 DENND6BQ8NEG7 585 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 OR2I1PQ8NGU4 316 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 FAM174AQ8TBP5 190 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 PIH1D2Q8WWB5 315 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 HTR3CQ8WXA8 447 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 RMDN1Q96DB5 314 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 IMP4Q96G21 291 aaKnown RBP22.11■■□□□ 1.13
VEGFA-217ENST00000518538 TEKT5Q96M29 485 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 KLF6Q99612 283 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-217ENST00000518538 C1QTNF7Q9BXJ2 289 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 SLC25A51Q9H1U9 297 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 DNAAF2Q9NVR5 837 aaKnown RBP22.11■■□□□ 1.13
VEGFA-217ENST00000518538 DLL3Q9NYJ7 618 aa22.11■■□□□ 1.13
VEGFA-217ENST00000518538 TLR4O00206 839 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 RAD51BO15315 384 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 ZSCAN12O43309 604 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 MAGEC1O60732 1142 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 PDHA1P08559 390 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 C6P13671 934 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 CTSKP43235 329 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 LIG3P49916 1009 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 EIF3EP60228 445 aaKnown RBP22.1■■□□□ 1.13
VEGFA-217ENST00000518538 SEMG2Q02383 582 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 HLA-BQ31612 363 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 GCNT7Q6ZNI0 430 aa22.1■■□□□ 1.13
VEGFA-217ENST00000518538 CDKL3Q8IVW4 592 aaPredicted RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms