RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 CCDC194A0A1B0GVG4 234 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A0A1W2PQ72 361 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FEZF1A0PJY2 475 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GXYLT2A0PJZ3 443 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CPED1A4D0V7 1026 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CTAGE9A4FU28 777 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MBD3L5A6NJ08 208 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PMS2P5A8MQ11 134 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MS4A18H0YCH9 400 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C16orf97H3BN30 126 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM178BH3BS89 294 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 P2RY10O00398 339 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLK4O00444 970 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NR5A2O00482 541 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHL1O00533 1208 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PEX12O00623 359 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 VCYO14598 125 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANKRD28O15084 1053 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPM1GO15355 546 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PRPF4O43172 522 aaKnown RBP eCLIP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 THAP12O43422 761 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPRY1O43609 319 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLRG1O43660 514 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT86O43790 486 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ECE2O60344 883 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCNT2O60583 730 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KCNJ13O60928 360 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PEX14O75381 377 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SOAT2O75908 522 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RNF8O76064 485 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZFAND5O76080 213 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LARGE1O95461 756 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CH25HO95992 272 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IL1AP01583 271 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PRSS2P07478 247 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CD63P08962 238 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HOXC6P09630 235 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CTAGE8P0CG41 777 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TFPIP10646 304 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RARGP13631 454 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRIM27P14373 513 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CTPS1P17812 591 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TFEBP19484 476 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AZU1P20160 251 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MSH3P20585 1137 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BCL3P20749 454 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 S1PR1P21453 382 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MATN1P21941 496 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYF6P23409 242 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CD27P26842 260 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GSTM2P28161 218 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EPHA2P29317 976 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SERPINA4P29622 427 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C21orf33P30042 268 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HOXD3P31249 432 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HOXC13P31276 330 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RPL3P39023 403 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PBX3P40426 434 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TM4SF4P48230 202 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARCN1P48444 511 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AMTP48728 403 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ALDH7A1P49419 539 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SUOXP51687 545 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ART1P52961 327 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EPHB1P54762 984 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NR1H2P55055 460 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CLDN20P56880 219 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPKP61978 463 aaKnown RBP eCLIP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RPL24P83731 157 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ADORA2A-AS1P86434 159 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ACSM2AQ08AH3 577 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAPQ12884 760 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NAA25Q14CX7 972 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 UGP2Q16851 508 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KIF19Q2TAC6 998 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLK5Q496M5 336 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF569Q5MCW4 686 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DCAF10Q5QP82 559 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TTC22Q5TAA0 569 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NSUN5P2Q63ZY6 315 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF772Q68DY9 489 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NXNQ6DKJ4 435 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OR7E24Q6IFN5 339 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANO7Q6IWH7 933 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MRNIPQ6NTE8 343 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WDR93Q6P2C0 686 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FBXO38Q6PIJ6 1188 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C1orf228Q6PIY5 440 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C19orf48Q6RUI8 117 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MTHFD1LQ6UB35 978 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLXDC2Q6UX71 529 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CCDC129Q6ZRS4 1044 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GPRIN3Q6ZVF9 776 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ASB18Q6ZVZ8 466 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CREB3L2Q70SY1 520 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BTN2A1Q7KYR7 527 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SHFQ7M4L6 423 aa0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PIWIL4Q7Z3Z4 852 aaKnown RBP0.3□□□□□ -2.36
RNU6-1049P-201ENST00000516414 UBE2Q1Q7Z7E8 422 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms