RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CPOQ8IVL8 374 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 LSM14AQ8ND56 463 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 LMO3Q8TAP4 145 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 CEP76Q8TAP6 659 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 TMEM18Q96B42 140 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 TTC14Q96N46 770 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 REEP2Q9BRK0 252 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 CHCHD6Q9BRQ6 235 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 CXorf56Q9H5V9 222 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 STN1Q9H668 368 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 ENTPD7Q9NQZ7 604 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 TLR8Q9NR97 1041 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 PLSCR4Q9NRQ2 329 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 OLA1Q9NTK5 396 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 PLEKHB1Q9UF11 243 aaPredicted RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 CDH22Q9UJ99 828 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 NOL7Q9UMY1 257 aaKnown RBP3.39□□□□□ -1.87
HERC4-215ENST00000515753 CNPY2Q9Y2B0 182 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 SHROOM2Q13796 1616 aa3.39□□□□□ -1.87
HERC4-215ENST00000515753 GOLGA6L10A0A0M3HER8 536 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 C17orf113A0A1B0GUU1 675 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 A0A1W2PRQ8 180 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 TARSL2A2RTX5 802 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 DDTLA6NHG4 134 aaPredicted RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 CBY3A6NI87 242 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 ZBED4O75132 1171 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 TMEM63AO94886 807 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 GLUD1P00367 558 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 MCCP23508 829 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 RRM1P23921 792 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 GPD2P43304 727 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 RAD52P43351 418 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 PTPN9P43378 593 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 AMTP48728 403 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 GLUD2P49448 558 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 CHRNDQ07001 517 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 FAM27E3Q08E93 113 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 TRAF2Q12933 501 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 HNF4GQ14541 408 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 SLC18A3Q16572 532 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 FSCBQ5H9T9 825 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 FNBP1LQ5T0N5 605 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 NAPEPLDQ6IQ20 393 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 GSG1LQ6UXU4 331 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 FAM83HQ6ZRV2 1179 aaPredicted RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 ZNF367Q7RTV3 350 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 RBM23Q86U06 439 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 FAM216AQ8WUB2 273 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 RSRC1Q96IZ7 334 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 APOLD1Q96LR9 279 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 COG8Q96MW5 612 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 TIGD1Q96MW7 591 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 CLSTN3Q9BQT9 956 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 POLDIP3Q9BY77 421 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 LMAN2LQ9H0V9 348 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 PREBQ9HCU5 417 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 WDR6Q9NNW5 1121 aaKnown RBP3.38□□□□□ -1.87
HERC4-215ENST00000515753 SMYD2Q9NRG4 433 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 TMEM160Q9NX00 188 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 NLKQ9UBE8 527 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 PTGDR2Q9Y5Y4 395 aa3.38□□□□□ -1.87
HERC4-215ENST00000515753 GOLGA3Q08378 1498 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 IGHV4-28A0A0C4DH34 117 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 A0A0U1RQG5 324 aaPredicted RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 A0A1B0GVT2 93 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 FSD2A1L4K1 749 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 SH2D7A6NKC9 451 aaPredicted RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 ASAP2O43150 1006 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 ANP32CO43423 234 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 GFPT2O94808 682 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 WEE2P0C1S8 567 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 VDRP11473 427 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 ATP1A3P13637 1013 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 MYF6P23409 242 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 TTKP33981 857 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 RFC1P35251 1148 aaPredicted RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 THPOP40225 353 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 TUBP50607 506 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 NUDT6P53370 316 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 NR1H2P55055 460 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 CCNG2Q16589 344 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 TDRD12Q587J7 1177 aaKnown RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 DCAF6Q58WW2 860 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 EFHC1Q5JVL4 640 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 GPATCH4Q5T3I0 446 aaKnown RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 CCDC30Q5VVM6 783 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 NAA35Q5VZE5 725 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 NADSYN1Q6IA69 706 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 C17orf99Q6UX52 265 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 ANKRD23Q86SG2 305 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 DENND6AQ8IWF6 608 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 TCP11L2Q8N4U5 519 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 RFWD2Q8NHY2 731 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 UCMAQ8WVF2 138 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 CD180Q99467 661 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 MSTO1Q9BUK6 570 aa3.37□□□□□ -1.87
HERC4-215ENST00000515753 PHF7Q9BWX1 381 aaPredicted RBP3.37□□□□□ -1.87
HERC4-215ENST00000515753 TAOK3Q9H2K8 898 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms