RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PRR19A6NJB7 356 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 NKX2-8O15522 239 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 SUOXP51687 545 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 SNX16P57768 344 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 OR1D5P58170 312 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 CDC20Q12834 499 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 KLRB1Q12918 225 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 MTM1Q13496 603 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 AMZ1Q400G9 498 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 ATXN7L2Q5T6C5 722 aaPredicted RBP11.03□□□□□ -0.64
DDX41-216ENST00000513562 FOXR2Q6PJQ5 311 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 C17orf82Q86X59 251 aaPredicted RBP11.03□□□□□ -0.64
DDX41-216ENST00000513562 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 OR56A4Q8NGH8 313 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 CCDC74BQ96LY2 380 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 GDAP1L1Q96MZ0 367 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 GSDMAQ96QA5 445 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 TBCBQ99426 244 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 DPEP2Q9H4A9 486 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 NDFIP2Q9NV92 336 aa11.03□□□□□ -0.64
DDX41-216ENST00000513562 TMEM202A6NGA9 273 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 TNFRSF10CO14798 259 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 PSMA7O14818 248 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 DUX1O43812 170 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 PCCBP05166 539 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 PRKAR1AP10644 381 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 THRAP10827 490 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 CD1CP29017 333 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 MAPKAPK2P49137 400 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 LIMK2P53671 638 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 KIAA1024LP59773 190 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 KRT85P78386 507 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 ELP6Q0PNE2 266 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 TRA2AQ13595 282 aaKnown RBP eCLIP11.02□□□□□ -0.65
DDX41-216ENST00000513562 BNIPLQ7Z465 357 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 NLRP14Q86W24 1093 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 TRIM59Q8IWR1 403 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 AGBL5Q8NDL9 886 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 APOBEC4Q8WW27 367 aaKnown RBP11.02□□□□□ -0.65
DDX41-216ENST00000513562 ART4Q93070 314 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 FUBP1Q96AE4 644 aaKnown RBP11.02□□□□□ -0.65
DDX41-216ENST00000513562 ASPSCR1Q9BZE9 553 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 TTYH3Q9C0H2 523 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 SYNCQ9H7C4 482 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 GPN2Q9H9Y4 310 aaPredicted RBP11.02□□□□□ -0.65
DDX41-216ENST00000513562 MRPL40Q9NQ50 206 aaKnown RBP11.02□□□□□ -0.65
DDX41-216ENST00000513562 PILRAQ9UKJ1 303 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
DDX41-216ENST00000513562 ANKRD17O75179 2603 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 TEP1Q99973 2627 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 TSPAN11A1L157 253 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 B4E171 279 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 TMCC1O94876 653 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 AGFG2O95081 481 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 IGSF6O95976 241 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 KRT7P08729 469 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 OAS2P29728 719 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 ALDH4A1P30038 563 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 SCNN1AP37088 669 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 TSPAN7P41732 249 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 UQCRFS1P47985 274 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 LIG3P49916 1009 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 MLLT10P55197 1068 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 MAZP56270 477 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 RAB15P59190 212 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 RNASE9P60153 205 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 NRG1Q02297 640 aaPredicted RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 RAD51Q06609 339 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 SEPT6Q14141 434 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 MANEALQ5VSG8 457 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 GJB7Q6PEY0 223 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 PLA2G15Q8NCC3 412 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 OR4D9Q8NGE8 314 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 CCL4L1Q8NHW4 92 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 HCAR2Q8TDS4 363 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 HMCESQ96FZ2 354 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 DHTKD1Q96HY7 919 aaPredicted RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 FAM81BQ96LP2 452 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 SPRY4Q9C004 299 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 MAGEH1Q9H213 219 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 RETREG1Q9H6L5 497 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 PCDH12Q9NPG4 1184 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 SLC39A1Q9NY26 324 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 HPCAL4Q9UM19 191 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 NEU3Q9UQ49 428 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 TP53TG5Q9Y2B4 290 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 DAAM1Q9Y4D1 1078 aa11.01□□□□□ -0.65
DDX41-216ENST00000513562 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
DDX41-216ENST00000513562 ZSCAN5CA6NGD5 496 aaPredicted RBP11□□□□□ -0.65
DDX41-216ENST00000513562 RHPN2P1A8MT19 583 aa11□□□□□ -0.65
DDX41-216ENST00000513562 CACNB4O00305 520 aaPredicted RBP11□□□□□ -0.65
DDX41-216ENST00000513562 ZW10O43264 779 aa11□□□□□ -0.65
DDX41-216ENST00000513562 RAMP2O60895 175 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms