RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 CELF6Q96J87 481 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 ERGIC2Q96RQ1 377 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 EDEM3Q9BZQ6 932 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 SLC39A8Q9C0K1 460 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 SYNDIG1Q9H7V2 258 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 PDFQ9HBH1 243 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 GPATCH2LQ9NWQ4 482 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 SIRPGQ9P1W8 387 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 PCDHGA8Q9Y5G5 932 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 LRRK1Q38SD2 2015 aa13.5□□□□□ -0.25
POLR2J3-217ENST00000513438 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 NTN3O00634 580 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 PRAMEF11O60813 436 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 RASGRP1O95267 797 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 PRKCGP05129 697 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 ALPIP09923 528 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 HTR1BP28222 390 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 PAPOLAP51003 745 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 NDST2P52849 883 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 SRP54P61011 504 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 RHDQ02161 417 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 SPIDRQ14159 915 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 AGERQ15109 404 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 CFAP58Q5T655 872 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 ERAP2Q6P179 960 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 LVRNQ6Q4G3 990 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 SASS6Q6UVJ0 657 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 RBM43Q6ZSC3 357 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 SRLQ86TD4 932 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 ARL14Q8N4G2 192 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 ZNF641Q96N77 438 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 DONSONQ9NYP3 566 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 GPR34Q9UPC5 381 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 FLNBO75369 2602 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-217ENST00000513438 CCDC187A0A096LP49 1063 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 CDRT15L2A8MXV6 281 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TNFSF15O95150 251 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TNFP01375 233 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 PCCBP05166 539 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 FERP16591 822 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 DESP17661 470 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 HTR7P34969 479 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 RGRP47804 291 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 CCL7P80098 99 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 SKOR1P84550 965 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 MYL5Q02045 173 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 NFATC4Q14934 902 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 CA9Q16790 459 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 BRAT1Q6PJG6 821 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 SDR16C5Q8N3Y7 309 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 KYQ8NBH2 561 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TSEN2Q8NCE0 465 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 PCDH19Q8TAB3 1148 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 CCDC97Q96F63 343 aaPredicted RBP13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TUBGCP5Q96RT8 1024 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 DHX35Q9H5Z1 703 aaKnown RBP13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 ANO10Q9NW15 660 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TAS2R14Q9NYV8 317 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 RABGEF1Q9UJ41 708 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 AP4E1Q9UPM8 1137 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 ATMQ13315 3056 aa13.48□□□□□ -0.25
POLR2J3-217ENST00000513438 TMCO5BA8MYB1 307 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 EEF2KO00418 725 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 DAPK3O43293 454 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 PALMO75781 387 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 PSMA2P25787 234 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 CSNK1DP48730 415 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 PDX1P52945 283 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 MAMLD1Q13495 774 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 KCTD16Q68DU8 428 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 ATL2Q8NHH9 583 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 WBP1Q96G27 269 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 WDR92Q96MX6 357 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 PARVAQ9NVD7 372 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 PCSK1NQ9UHG2 260 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
POLR2J3-217ENST00000513438 CFAP46Q8IYW2 2715 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms