RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 BECN2A8MW95 431 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
SPCS3-204ENST00000513139 NUDT21O43809 227 aaKnown RBP14.05□□□□□ -0.16
SPCS3-204ENST00000513139 SRGAP2O75044 1071 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 PPP1R2P41236 205 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 SULT1E1P49888 294 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 SUOXP51687 545 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 STX17P56962 302 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 ARHGEF7Q14155 803 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 NCAPHQ15003 741 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 AGERQ15109 404 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 CLPPQ16740 277 aaPredicted RBP14.05□□□□□ -0.16
SPCS3-204ENST00000513139 SLC25A52Q3SY17 297 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 PHF19Q5T6S3 580 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 ENPP7Q6UWV6 458 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 GDPD4Q6W3E5 623 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 RD3Q7Z3Z2 195 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 NELFBQ8WX92 580 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 ARHGEF2Q92974 986 aaKnown RBP14.05□□□□□ -0.16
SPCS3-204ENST00000513139 APOOQ9BUR5 198 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 SYNCQ9H7C4 482 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 LRIT1Q9P2V4 623 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 DKK3Q9UBP4 350 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 KLQ9UEF7 1012 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 CTNND2Q9UQB3 1225 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 PCDHGA3Q9Y5H0 932 aa14.05□□□□□ -0.16
SPCS3-204ENST00000513139 PRRC2CQ9Y520 2896 aaKnown RBP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 CAPN5O15484 640 aaPredicted RBP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 CPNE6O95741 557 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 GNA14O95837 355 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TNFP01375 233 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 SCNN1AP37088 669 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 MARSP56192 900 aaKnown RBP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 RAD51Q06609 339 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 HLTFQ14527 1009 aaKnown RBP eCLIP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 C16orf72Q14CZ0 275 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 WSCD2Q2TBF2 565 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 PTPN20Q4JDL3 420 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TMEM52BQ4KMG9 183 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 C14orf28Q4W4Y0 310 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 EFHC2Q5JST6 749 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TTI2Q6NXR4 508 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 SASS6Q6UVJ0 657 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 PIM3Q86V86 326 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 PASD1Q8IV76 773 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 MLKLQ8NB16 471 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 WDR92Q96MX6 357 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TAAR9Q96RI9 348 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TBCBQ99426 244 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 WRAP53Q9BUR4 548 aaKnown RBP14.04□□□□□ -0.16
SPCS3-204ENST00000513139 SEMA6CQ9H3T2 930 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 TMPRSS4Q9NRS4 437 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 HPCAL4Q9UM19 191 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 ACTL7AQ9Y615 435 aa14.04□□□□□ -0.16
SPCS3-204ENST00000513139 SYCE3A1L190 88 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 TIMP2P16035 220 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 RNASE9P60153 205 aaKnown RBP14.03□□□□□ -0.16
SPCS3-204ENST00000513139 B4GALNT1Q00973 533 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 PTK2Q05397 1052 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 ELP6Q0PNE2 266 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 INPP5AQ14642 412 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 TCEA2Q15560 299 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 MAP9Q49MG5 647 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 LRRC73Q5JTD7 316 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 BNIPLQ7Z465 357 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 DRC7Q8IY82 874 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 IL22RA1Q8N6P7 574 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 FAM46DQ8NEK8 389 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 C9orf43Q8TAL5 461 aaPredicted RBP14.03□□□□□ -0.16
SPCS3-204ENST00000513139 SHC3Q92529 594 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 TTYH3Q9C0H2 523 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 MAGEH1Q9H213 219 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 LRRC4CQ9HCJ2 640 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 MFHAS1Q9Y4C4 1052 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPCS3-204ENST00000513139 CRYBG3Q68DQ2 2970 aa14.03□□□□□ -0.16
SPCS3-204ENST00000513139 ZSCAN5CA6NGD5 496 aaPredicted RBP14.02□□□□□ -0.17
SPCS3-204ENST00000513139 ZNF891A8MT65 544 aaPredicted RBP14.02□□□□□ -0.17
SPCS3-204ENST00000513139 AGRPO00253 132 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 ZW10O43264 779 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 CCL4P13236 92 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 LIFP15018 202 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 KRT9P35527 623 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 ACVRL1P37023 503 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 USP8P40818 1118 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 MAPKAPK2P49137 400 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 ARSDP51689 593 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 NRG1Q02297 640 aaPredicted RBP14.02□□□□□ -0.17
SPCS3-204ENST00000513139 TYRO3Q06418 890 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 PAK1Q13153 545 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 MTM1Q13496 603 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 TRIM65Q6PJ69 517 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 TAF8Q7Z7C8 310 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 IRF2BP1Q8IU81 584 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 HCAR2Q8TDS4 363 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 JPH3Q8WXH2 748 aaPredicted RBP14.02□□□□□ -0.17
SPCS3-204ENST00000513139 PDXPQ96GD0 296 aa14.02□□□□□ -0.17
SPCS3-204ENST00000513139 GDAP1L1Q96MZ0 367 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms