RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 DDX50Q9BQ39 737 aaKnown RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 FEM1AQ9BSK4 669 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 MAGEF1Q9HAY2 307 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 RAB20Q9NX57 234 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 MAPK8IP1Q9UQF2 711 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 PCDHB14Q9Y5E9 798 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 ITPR2Q14571 2701 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 ANKRD36A6QL64 1941 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 TPP1O14773 563 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 KLF4O43474 513 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 CUTAO60888 179 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 ZNF821O75541 412 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 VDRP11473 427 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 HOXB4P17483 251 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 RRM1P23921 792 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 GIPRP48546 466 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 SERINC3Q13530 473 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 SLC12A1Q13621 1099 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 INPP5AQ14642 412 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 PRRT3Q5FWE3 981 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 WIPI1Q5MNZ9 446 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 KCTD16Q68DU8 428 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 LCLAT1Q6UWP7 414 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 ERN2Q76MJ5 926 aaKnown RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 CCDC117Q8IWD4 279 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 FAM26EQ8N5C1 309 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 FAM169BQ8N8A8 192 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 KAT5Q92993 513 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 VOPP1Q96AW1 172 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 WDR89Q96FK6 387 aaPredicted RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 IL12RB2Q99665 862 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 SLC12A9Q9BXP2 914 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 SLC17A9Q9BYT1 436 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 TNKS2Q9H2K2 1166 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 EXOC1Q9NV70 894 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 APOBEC3BQ9UH17 382 aaKnown RBP12.48□□□□□ -0.41
SDHA-215ENST00000512962 SLC25A13Q9UJS0 675 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 ITM2BQ9Y287 266 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 LOXL2Q9Y4K0 774 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 HS3ST3A1Q9Y663 406 aa12.48□□□□□ -0.41
SDHA-215ENST00000512962 CHD5Q8TDI0 1954 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 TCAF2A6NFQ2 919 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 F5H5T6 163 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 M0QYV0 167 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 NVLO15381 856 aaKnown RBP12.47□□□□□ -0.41
SDHA-215ENST00000512962 YY2O15391 372 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 RPLP0P05388 317 aaKnown RBP12.47□□□□□ -0.41
SDHA-215ENST00000512962 TSHRP16473 764 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 CASRP41180 1078 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 POLE2P56282 527 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 PFN3P60673 137 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 MORC3Q14149 939 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 TAF5Q15542 800 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 ZCWPW2Q504Y3 356 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 LINGO4Q6UY18 593 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 PLPPR2Q96GM1 343 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 SIRPGQ9P1W8 387 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 HS3ST2Q9Y278 367 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 DAAM1Q9Y4D1 1078 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 FADS3Q9Y5Q0 445 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
SDHA-215ENST00000512962 KCNU1A8MYU2 1149 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 SMAD7O15105 426 aaKnown RBP12.46□□□□□ -0.41
SDHA-215ENST00000512962 LEFTY1O75610 366 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 ENDOD1O94919 500 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 DLGAP3O95886 979 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 TRUB2O95900 331 aaKnown RBP12.46□□□□□ -0.41
SDHA-215ENST00000512962 SFTPCP11686 197 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 KRT13P13646 458 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 CCKBRP32239 447 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 IGFALSP35858 605 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 INHBCP55103 352 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 LRMPQ12912 555 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 KCNAB2Q13303 367 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 NFIL3Q16649 462 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 ATL3Q6DD88 541 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.41
SDHA-215ENST00000512962 TTC39CQ8N584 583 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 PCDH19Q8TAB3 1148 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 USP7Q93009 1102 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 NAT6Q93015 286 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 FAM149B1Q96BN6 582 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 FAXDC2Q96IV6 333 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 BTN2A3PQ96KV6 586 aa12.46□□□□□ -0.41
SDHA-215ENST00000512962 GFM1Q96RP9 751 aaKnown RBP12.46□□□□□ -0.41
SDHA-215ENST00000512962 CPEB1Q9BZB8 566 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms