RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 PSKH2Q96QS6 385 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 USP28Q96RU2 1077 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 GORASP1Q9BQQ3 440 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.33□□□□□ -1.4
CHD1-208ENST00000512392 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SLC25A32Q9H2D1 315 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 WDR6Q9NNW5 1121 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 LIN7CQ9NUP9 197 aaKnown RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 HCN3Q9P1Z3 774 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 CRNNQ9UBG3 495 aaPredicted RBP6.33□□□□□ -1.4
CHD1-208ENST00000512392 TRPC4Q9UBN4 977 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ASB1Q9Y576 335 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 ENTPD2Q9Y5L3 495 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 SNX14Q9Y5W7 946 aa6.33□□□□□ -1.4
CHD1-208ENST00000512392 RPTORQ8N122 1335 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 EIF3CLB5ME19 914 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 GRM6O15303 877 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 EIF3DO15371 548 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD1-208ENST00000512392 ADCY6O43306 1168 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 CIDEAO60543 219 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 SEC24DO94855 1032 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 OR6B1O95007 311 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 ZNF205O95201 554 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 CELF2O95319 508 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 KRT14P02533 472 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 CFIP05156 583 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 GRPP07492 148 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 VIMP08670 466 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 C1SP09871 688 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PRKACBP22694 351 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 ARHGAP25P42331 645 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 SNU13P55769 128 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 MYL6P60660 151 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 ROM1Q03395 351 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 SLFN5Q08AF3 891 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PPIGQ13427 754 aaKnown RBP eCLIP6.32□□□□□ -1.4
CHD1-208ENST00000512392 TSTA3Q13630 321 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 FHL3Q13643 280 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 USH1GQ495M9 461 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 SFMBT2Q5VUG0 894 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 WDR88Q6ZMY6 472 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 GPRIN1Q7Z2K8 1008 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PQLC1Q8N2U9 271 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 L3MBTL4Q8NA19 623 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 AGBL3Q8NEM8 1001 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 CADM4Q8NFZ8 388 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 EXOC6Q8TAG9 804 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PLEKHO2Q8TD55 490 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 SMARCE1Q969G3 411 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 LRRC45Q96CN5 670 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 HDAC11Q96DB2 347 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PHF21BQ96EK2 531 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 TSPAN17Q96FV3 270 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 PRR11Q96HE9 360 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 ZNF558Q96NG5 402 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 NECTIN4Q96NY8 510 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 EIF3CQ99613 913 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 TINAGL1Q9GZM7 467 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 PITHD1Q9GZP4 211 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 POLR1EQ9GZS1 481 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 TFB2MQ9H5Q4 396 aaKnown RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 BARX1Q9HBU1 254 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 PRMT8Q9NR22 394 aaPredicted RBP6.32□□□□□ -1.4
CHD1-208ENST00000512392 ALKBH4Q9NXW9 302 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 FBLN5Q9UBX5 448 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 FTSJ1Q9UET6 329 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 CDC14AQ9UNH5 594 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 GMEB1Q9Y692 573 aa6.32□□□□□ -1.4
CHD1-208ENST00000512392 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 FAM90A8PA6NJQ4 464 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 A6NL46 340 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 F8WDY8 70 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 HGSO14964 777 aaPredicted RBP6.31□□□□□ -1.4
CHD1-208ENST00000512392 SLC16A3O15427 465 aaKnown RBP6.31□□□□□ -1.4
CHD1-208ENST00000512392 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
CHD1-208ENST00000512392 PAGE4O60829 102 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 CDKL5O76039 1030 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 FAM90A13PP0C7W8 464 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 FAM90A24PP0C7X0 464 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 THRBP10828 461 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 COX7A2P14406 83 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 CAPN2P17655 700 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 HAAOP46952 286 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 CDK7P50613 346 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 SCGB2A2Q13296 93 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 CUL1Q13616 776 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 FUT11Q495W5 492 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 NADK2Q4G0N4 442 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 TEX35Q5T0J7 233 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 PDPK2PQ6A1A2 396 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 KIAA1324Q6UXG2 1013 aaKnown RBP6.31□□□□□ -1.4
CHD1-208ENST00000512392 SYVN1Q86TM6 617 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 ZNF573Q86YE8 665 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 UNC5BQ8IZJ1 945 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
CHD1-208ENST00000512392 OR8J1Q8NGP2 316 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 PSMA8Q8TAA3 256 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 ACTRT2Q8TDY3 377 aa6.31□□□□□ -1.4
CHD1-208ENST00000512392 ASB11Q8WXH4 323 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms