RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	DENND6B	Q8NEG7	585 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CCHCR1	Q8TD31	782 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	HTR3C	Q8WXA8	447 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	KRT35	Q92764	455 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	FAM131C	Q96AQ9	280 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	ARRDC3	Q96B67	414 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	KLHDC7B	Q96G42	594 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	LGMN	Q99538	433 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	EDEM2	Q9BV94	578 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	HEMGN	Q9BXL5	484 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	SLC17A9	Q9BYT1	436 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CARD9	Q9H257	536 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	GOLPH3	Q9H4A6	298 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	GDF3	Q9NR23	364 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	KLHL8	Q9P2G9	620 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	SALL4	Q9UJQ4	1053 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	SARDH	Q9UL12	918 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	PCDHB9	Q9Y5E1	797 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	FADS3	Q9Y5Q0	445 aa		7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	MUC22	E2RYF6	1773 aa	Predicted RBP	7.53	□□□□□ -1.2
NR1I3-231	ENST00000512340	CHD6	Q8TD26	2715 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	EML5	Q05BV3	1969 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SHROOM3	Q8TF72	1996 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	GOLGA6L10	A0A0M3HER8	536 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	TSPAN11	A1L157	253 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340		A6NNZ2	444 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	ESPN	B1AK53	854 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	KCNK1	O00180	336 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	KCNK3	O14649	394 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	VILL	O15195	856 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PSMD3	O43242	534 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PIGN	O95427	931 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	GAS8	O95995	478 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	RBP3	P10745	1247 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	TIMP2	P16035	220 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	KEL	P23276	732 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	HTR1B	P28222	390 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	MAT2A	P31153	395 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	STIP1	P31948	543 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	THOP1	P52888	689 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	LIMK1	P53667	647 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC14A1	Q13336	389 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PTK2B	Q14289	1009 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC14A2	Q15849	920 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	P3H1	Q32P28	736 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	TMEM52B	Q4KMG9	183 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	MEI1	Q5TIA1	1274 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PID1	Q7Z2X4	250 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	ZC3H18	Q86VM9	953 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CPNE8	Q86YQ8	564 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CAMK1D	Q8IU85	385 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC41A1	Q8IVJ1	513 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	RAVER1	Q8IY67	606 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	FRMD1	Q8N878	549 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SPOCK2	Q92563	424 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PDLIM2	Q96JY6	352 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PBK	Q96KB5	322 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CNTNAP3B	Q96NU0	1288 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	AGAP3	Q96P47	875 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	OLFM3	Q96PB7	478 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	QKI	Q96PU8	341 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	IL12RB2	Q99665	862 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	GTPBP2	Q9BX10	602 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	FSD1L	Q9BXM9	530 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CNTNAP3	Q9BZ76	1288 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC25A51	Q9H1U9	297 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC32A1	Q9H598	525 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	NOD2	Q9HC29	1040 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	TM9SF3	Q9HD45	589 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	PCDH12	Q9NPG4	1184 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	RAD18	Q9NS91	495 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	EVA1B	Q9NVM1	165 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	TRIM10	Q9UDY6	481 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	SERGEF	Q9UGK8	458 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	FEZ2	Q9UHY8	353 aa	Predicted RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	ZKSCAN5	Q9Y2L8	839 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	AAR2	Q9Y312	384 aa	Known RBP	7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	RAI2	Q9Y5P3	530 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	ACTL7A	Q9Y615	435 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	HS3ST3A1	Q9Y663	406 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CAPN6	Q9Y6Q1	641 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	FAM208B	Q5VWN6	2430 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CEP192	Q8TEP8	1941 aa		7.52	□□□□□ -1.21
NR1I3-231	ENST00000512340	CABIN1	Q9Y6J0	2220 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	MAP1B	P46821	2468 aa	Known RBP	7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340		H3BM21	787 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	PSMD11	O00231	422 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	RNF103	O00237	685 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	PLK4	O00444	970 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	RIOK3	O14730	519 aa	Known RBP	7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	AREL1	O15033	823 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	SLC31A1	O15431	190 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	HTRA2	O43464	458 aa	Predicted RBP	7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	ZNF500	O60304	480 aa	Predicted RBP	7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	PGLS	O95336	258 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	MAP3K6	O95382	1288 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	PEX11B	O96011	259 aa		7.51	□□□□□ -1.21
NR1I3-231	ENST00000512340	IGHV4-34	P06331	123 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms