RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 CENPTQ96BT3 561 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 FAF2Q96CS3 445 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 MRFAP1L1Q96HT8 127 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 MGME1Q9BQP7 344 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 NOD2Q9HC29 1040 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 SCUBE2Q9NQ36 999 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 DNAJC28Q9NX36 388 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 KLF15Q9UIH9 416 aa16.61■□□□□ 0.25
DDX41-213ENST00000512027 PNMA8BQ9ULN7 279 aaPredicted RBP16.61■□□□□ 0.25
DDX41-213ENST00000512027 C3orf70A6NLC5 250 aaPredicted RBP16.6■□□□□ 0.25
DDX41-213ENST00000512027 TRIM38O00635 465 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 LDOC1O95751 146 aaPredicted RBP16.6■□□□□ 0.25
DDX41-213ENST00000512027 KRT1P04264 644 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 DGKAP23743 735 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 GARSP41250 739 aaKnown RBP16.6■□□□□ 0.25
DDX41-213ENST00000512027 MAGEA1P43355 309 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 RABIFP47224 123 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 PFN3P60673 137 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 TRAF2Q12933 501 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 MARC1Q5VT66 337 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 ERAP2Q6P179 960 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 ZSCAN30Q86W11 494 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 MAP7D3Q8IWC1 876 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 HCAR2Q8TDS4 363 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 RNF157Q96PX1 679 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 NUDCD1Q96RS6 583 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
DDX41-213ENST00000512027 TCEAL2Q9H3H9 227 aaPredicted RBP16.6■□□□□ 0.25
DDX41-213ENST00000512027 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
DDX41-213ENST00000512027 A0A0U1RQS6 177 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 SPTY2D1-AS1A0A0U1RR47 76 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 ENC1O14682 589 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 PIAS2O75928 621 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 NEBLO76041 1014 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 TRIM16O95361 564 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 COMTP21964 271 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 SUOXP51687 545 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 ITKQ08881 620 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 EIF2B5Q13144 721 aaKnown RBP16.59■□□□□ 0.25
DDX41-213ENST00000512027 IHHQ14623 411 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 LLGL1Q15334 1064 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 WSCD2Q2TBF2 565 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 NPNTQ6UXI9 565 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 RBFAQ8N0V3 343 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 PLD5Q8N7P1 536 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 NSMCE1Q8WV22 266 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 RNF25Q96BH1 459 aaPredicted RBP16.59■□□□□ 0.25
DDX41-213ENST00000512027 SMIM14Q96QK8 99 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 DTLQ9NZJ0 730 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 B4GALT6Q9UBX8 382 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 INTUQ9ULD6 942 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 TTLL3Q9Y4R7 772 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
DDX41-213ENST00000512027 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.58■□□□□ 0.24
DDX41-213ENST00000512027 SIGLEC6O43699 453 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 SPOPO43791 374 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 LZTS3O60299 673 aaPredicted RBP16.58■□□□□ 0.24
DDX41-213ENST00000512027 DKK1O94907 266 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 LCA5LO95447 670 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 CPP00450 1065 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 PCCBP05166 539 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 GIMD1P0DJR0 217 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 MYF5P13349 255 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 GM2AP17900 193 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 HSPA9P38646 679 aaKnown RBP16.58■□□□□ 0.24
DDX41-213ENST00000512027 NOP2P46087 812 aaKnown RBP16.58■□□□□ 0.24
DDX41-213ENST00000512027 DYNLT1P63172 113 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 DSC2Q02487 901 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 DHRS13Q6UX07 377 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 UNQ6494/PRO21346Q6UXR6 183 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 LIPIQ6XZB0 460 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 B4GALNT4Q76KP1 1039 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 DPPA4Q7L190 304 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 PARGQ86W56 976 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 BBS5Q8N3I7 341 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 PLA2G15Q8NCC3 412 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 GATA6Q92908 595 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 SEMA3CQ99985 751 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 PCDHA13Q9Y5I0 950 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 HEY1Q9Y5J3 304 aa16.58■□□□□ 0.24
DDX41-213ENST00000512027 FAM149AA5PLN7 773 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 RCCD1A6NED2 376 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 SCAMP1O15126 338 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 MATN3O15232 486 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 HTRA2O43464 458 aaPredicted RBP16.57■□□□□ 0.24
DDX41-213ENST00000512027 HLA-DQB2P05538 268 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 ELFN1P0C7U0 828 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 NME1P15531 152 aaKnown RBP16.57■□□□□ 0.24
DDX41-213ENST00000512027 MARCKSL1P49006 195 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 ACADVLP49748 655 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 THOP1P52888 689 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 LRRC14Q15048 493 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 TCEAL1Q15170 157 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 TCEA2Q15560 299 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 IFI16Q16666 785 aaKnown RBP16.57■□□□□ 0.24
DDX41-213ENST00000512027 MFSD7Q6UXD7 560 aa16.57■□□□□ 0.24
DDX41-213ENST00000512027 DCP2Q8IU60 420 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms