RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 KLHL32Q96NJ5 620 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 KCTD15Q96SI1 283 aaPredicted RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 KLF6Q99612 283 aaPredicted RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 EIF3CQ99613 913 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 SNRNP25Q9BV90 132 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 C1QTNF2Q9BXJ5 285 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 TSGA10Q9BZW7 698 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 SLC39A8Q9C0K1 460 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 DHX35Q9H5Z1 703 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 CATSPERBQ9H7T0 1116 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 L2HGDHQ9H9P8 463 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 PDFQ9HBH1 243 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 LUC7LQ9NQ29 371 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 KLHL11Q9NVR0 708 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 UCKL1Q9NWZ5 548 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 TRMT1Q9NXH9 659 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 LHX3Q9UBR4 397 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 CNOT8Q9UFF9 292 aaKnown RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 HPCAL4Q9UM19 191 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 AP4E1Q9UPM8 1137 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 ITM2BQ9Y287 266 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 MFHAS1Q9Y4C4 1052 aa5.9□□□□□ -1.46
RNF4-217ENST00000511892 EPN1Q9Y6I3 576 aaPredicted RBP5.9□□□□□ -1.46
RNF4-217ENST00000511892 SCN8AQ9UQD0 1980 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 KALRNO60229 2985 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 UQCRHLA0A096LP55 91 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 SOWAHDA6NJG2 315 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 USP27XA6NNY8 438 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 EEF2KO00418 725 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 CTIFO43310 598 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 TSPAN6O43657 245 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 PRAMEF11O60813 436 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 NDUFA10O95299 355 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 PIGNO95427 931 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 UQCRHP07919 91 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ERCC2P18074 760 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 DGKAP23743 735 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 IL1R2P27930 398 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 HTR7P34969 479 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 RGRP47804 291 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ACADVLP49748 655 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 PAPOLAP51003 745 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 MMP16P51512 607 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 NDST2P52849 883 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CLDN6P56747 220 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 TPI1P60174 286 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 GUCA2AQ02747 115 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 DPYSQ14117 519 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 FZD2Q14332 565 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 INAVAQ3KP66 663 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CCDC157Q569K6 752 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ZNF542PQ5EBM4 170 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 TXNRD3NBQ6F5E7 133 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 GDPD4Q6W3E5 623 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 RFX8Q6ZV50 586 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 TTC7BQ86TV6 843 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ZNF354CQ86Y25 554 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 PSTKQ8IV42 348 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 TP53INP2Q8IXH6 220 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 NPWQ8N729 165 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CASKIN2Q8WXE0 1202 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ASB12Q8WXK4 309 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 RAB7BQ96AH8 199 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CENPTQ96BT3 561 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 ZNF653Q96CK0 615 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 BTBD6Q96KE9 485 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CCDC42Q96M95 316 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 GDAP1L1Q96MZ0 367 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 LENG8Q96PV6 779 aaPredicted RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 CALN1Q9BXU9 219 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 OSBPL1AQ9BXW6 950 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CPEB1Q9BZB8 566 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 ETNK2Q9NVF9 386 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CWC15Q9P013 229 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 UBA2Q9UBT2 640 aaPredicted RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 KLF15Q9UIH9 416 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 RALYQ9UKM9 306 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 PNMA8BQ9ULN7 279 aaPredicted RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 NENFQ9UMX5 172 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 PCDHGA1Q9Y5H4 931 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 BZW2Q9Y6E2 419 aaKnown RBP5.89□□□□□ -1.47
RNF4-217ENST00000511892 PTPRQQ9UMZ3 2332 aa5.89□□□□□ -1.47
RNF4-217ENST00000511892 CACNA1GO43497 2377 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 A0A087X0T9 212 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 LY6G6EA0A0G2JKS1 128 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SPTY2D1-AS1A0A0U1RR47 76 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 TSPAN11A1L157 253 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 TRABD2BA6NFA1 517 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 A6NNZ2 444 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 NEMP1O14524 444 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MUSKO15146 869 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SIGLEC6O43699 453 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 KRT86O43790 486 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PRPSAP2O60256 369 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 MMP20O60882 483 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 PIAS2O75928 621 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 RNF8O76064 485 aa5.88□□□□□ -1.47
RNF4-217ENST00000511892 SLU7O95391 586 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms