RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 C14orf28Q4W4Y0 310 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 C2CD6Q53TS8 623 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 MANEALQ5VSG8 457 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 TRIM65Q6PJ69 517 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM46DQ8NEK8 389 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 WDR92Q96MX6 357 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 HAPLN3Q96S86 360 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 OSBPL1AQ9BXW6 950 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 B3GNT4Q9C0J1 378 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 KLC2Q9H0B6 622 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 TMEM168Q9H0V1 697 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 DNAI1Q9UI46 699 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 ANAPC2Q9UJX6 822 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 STAP1Q9ULZ2 295 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 TMEM110-MUSTN1A8MSY1 372 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM72CH0Y354 149 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 DUX1O43812 170 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 F9P00740 461 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 UGT1A3P35503 534 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 MARSP56192 900 aaKnown RBP19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 MAZP56270 477 aaKnown RBP19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 OR1D5P58170 312 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 POLD3Q15054 466 aaPredicted RBP19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 MAP9Q49MG5 647 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM72AQ5TYM5 149 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 SPECC1LQ69YQ0 1117 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM72DQ6L9T8 149 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 TAF8Q7Z7C8 310 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 SLC47A2Q86VL8 602 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM72BQ86X60 149 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 NELFBQ8WX92 580 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 SMARCE1Q969G3 411 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 CFAP57Q96MR6 1250 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 SYNCQ9H7C4 482 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 PPARGC1AQ9UBK2 798 aaKnown RBP19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 DACH1Q9UI36 760 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 MAN1B1Q9UKM7 699 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 PAXBP1Q9Y5B6 917 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 B3GALT1Q9Y5Z6 326 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 DGKBQ9Y6T7 804 aa19.17■□□□□ 0.66
HMGCS1-206ENST00000511774 ANKRD17O75179 2603 aaKnown RBP19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 IGHV5-10-1A0A0J9YXX1 117 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 CXorf51AA0A1B0GTR3 108 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 NKX2-8O15522 239 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 TMCC1O94876 653 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 PIGNO95427 931 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 TNFP01375 233 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 PCCBP05166 539 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 CLCN1P35523 988 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 STX17P56962 302 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 AMZ1Q400G9 498 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 ENOSF1Q7L5Y1 443 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 XYLT1Q86Y38 959 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 MIB2Q96AX9 1013 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 NOL6Q9H6R4 1146 aaKnown RBP19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 DKK3Q9UBP4 350 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 PRRC2CQ9Y520 2896 aaKnown RBP19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 CELSR2Q9HCU4 2923 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 CRYBG3Q68DQ2 2970 aa19.16■□□□□ 0.66
HMGCS1-206ENST00000511774 NUDT21O43809 227 aaKnown RBP19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 CPNE6O95741 557 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 PRKCGP05129 697 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 HTR1BP28222 390 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 CCR10P46092 362 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 ARHGEF7Q14155 803 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM102AQ5T9C2 384 aaPredicted RBP19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 ZSWIM9Q86XI8 627 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 HSCBQ8IWL3 235 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 PELI3Q8N2H9 469 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 C9orf43Q8TAL5 461 aaPredicted RBP19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 CCDC74BQ96LY2 380 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 TAAR9Q96RI9 348 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 TTYH3Q9C0H2 523 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 PCDH12Q9NPG4 1184 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 SPATS2LQ9NUQ6 558 aaKnown RBP19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 CTNND2Q9UQB3 1225 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 PCDHGA3Q9Y5H0 932 aa19.15■□□□□ 0.66
HMGCS1-206ENST00000511774 SMC2O95347 1197 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 GABRB2P47870 512 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 ATP1A2P50993 1020 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 TMEM164Q5U3C3 297 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 PIM3Q86V86 326 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 C17orf82Q86X59 251 aaPredicted RBP19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 ZDHHC17Q8IUH5 632 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 CACNA2D3Q8IZS8 1091 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 IL22RA1Q8N6P7 574 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 ART4Q93070 314 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 GDAP1L1Q96MZ0 367 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 LGR4Q9BXB1 951 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 CDH19Q9H159 772 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 DPEP2Q9H4A9 486 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 SIX2Q9NPC8 291 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 TMEM248Q9NWD8 314 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 TMEM59LQ9UK28 342 aa19.14■□□□□ 0.65
HMGCS1-206ENST00000511774 FOXN3O00409 490 aaPredicted RBP19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 MTSS1O43312 755 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 GM2AP17900 193 aa19.13■□□□□ 0.65
HMGCS1-206ENST00000511774 CD1CP29017 333 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms