RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MYMKA6NI61 221 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 FAM90A20PA6NIJ5 464 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC15A5A6NIM6 579 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 KCNU1A8MYU2 1149 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3LB9A6J9 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 RRHO14718 337 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 INSIG1O15503 277 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 HEXIM1O94992 359 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 ALDOAP04075 364 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 ENO1P06733 434 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3HP0C7X1 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 NR4A2P43354 598 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 CCR10P46092 362 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 KCNJ4P48050 445 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 VPS41P49754 854 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 ACLYP53396 1101 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 CCL23P55773 120 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 RNASELQ05823 741 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SRSF1Q07955 248 aaKnown RBP eCLIP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 DCTN1Q14203 1278 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 DAZAP2Q15038 168 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 FBXO47Q5MNV8 452 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 N4BP2L1Q5TBK1 243 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 FKBP1CQ5VVH2 108 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3GQ6DHY5 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 AWAT2Q6E213 333 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3CQ6IPX1 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 MIS18BP1Q6P0N0 1132 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TECPR1Q7Z6L1 1165 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 MRPL10Q7Z7H8 261 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 RFX6Q8HWS3 928 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 CNGA4Q8IV77 575 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 FTSJ3Q8IY81 847 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3Q8IZP1 549 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SUMF1Q8NBK3 374 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC2A12Q8TD20 617 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 CSGALNACT1Q8TDX6 532 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 GLT1D1Q96MS3 346 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 GPR78Q96P69 363 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TESK2Q96S53 571 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 NPAS1Q99742 590 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 PORCNQ9H237 461 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SEPSECSQ9HD40 501 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TXNRD2Q9NNW7 524 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 KCND3Q9UK17 655 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 PCDHA10Q9Y5I2 948 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 RAI2Q9Y5P3 530 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 ELP1O95163 1332 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 HECTD1Q9ULT8 2610 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 PTPRFP10586 1907 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 DOPEY1Q5JWR5 2465 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ROBO3Q96MS0 1386 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 MYO9AB2RTY4 2548 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 MYO18BQ8IUG5 2567 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 FRYLO94915 3013 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 A0A0U1RQG5 324 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 AGAP5A6NIR3 686 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 E7EVH7 732 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 J3QKU1 62 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 RNF8O76064 485 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 NTN1O95631 604 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 PGK1P00558 417 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 RFPL3SP0C7P2 107 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 AOC1P19801 751 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 TACR3P29371 465 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 AARSP49588 968 aaKnown RBP eCLIP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 MCM2P49736 904 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 SLC37A1P57057 533 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 CCNA1P78396 465 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 EFR3AQ14156 821 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ADCK5Q3MIX3 580 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 GLE1Q53GS7 698 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 WDR78Q5VTH9 848 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 TMEM88Q6PEY1 159 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 CYP26C1Q6V0L0 522 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 COPS6Q7L5N1 327 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ADGRF3Q8IZF5 1079 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 EXD3Q8N9H8 876 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ADPRHL1Q8NDY3 354 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 OSR1Q8TAX0 266 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 CLEC4CQ8WTT0 213 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 MAP4K1Q92918 833 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 RILPL2Q969X0 211 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 RPGRIP1Q96KN7 1286 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ZSCAN31Q96LW9 406 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 FCRL5Q96RD9 977 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 FAM118BQ9BPY3 351 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 RTP3Q9BQQ7 232 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 PHF7Q9BWX1 381 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 CLMPQ9H6B4 373 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 MLXIPLQ9NP71 852 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 TMLHEQ9NVH6 421 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 ARL8BQ9NVJ2 186 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 FEM1BQ9UK73 627 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 BAG5Q9UL15 447 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 A0A1B0GUL6 1792 aa3.89□□□□□ -1.79
TOPBP1-208ENST00000511439 COL11A1P12107 1806 aaPredicted RBP3.88□□□□□ -1.79
TOPBP1-208ENST00000511439 CCDC189A1A4V9 331 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms