RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CLNS1AP54105 237 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 PMS2P54278 862 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 SRSF1Q07955 248 aaKnown RBP eCLIP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 FGFBP1Q14512 234 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 DUSP6Q16828 381 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 SOWAHAQ2M3V2 549 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ODF3L2Q3SX64 289 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 DCAF6Q58WW2 860 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 OTUD1Q5VV17 481 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZKSCAN2Q63HK3 967 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 TTI2Q6NXR4 508 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MZT2BQ6NZ67 158 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 NEK10Q6ZWH5 1172 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MON1BQ7L1V2 547 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF367Q7RTV3 350 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MB21D2Q8IYB1 491 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 TEX45Q8NA69 505 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM116Q8NCL8 245 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 GPT2Q8TD30 523 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 FBXL8Q96CD0 374 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 PERPQ96FX8 193 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 APOLD1Q96LR9 279 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF778Q96MU6 729 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ITPAQ9BY32 194 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 RBM38Q9H0Z9 239 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MAGEE1Q9HCI5 957 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 FBRSL1Q9HCM7 1045 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 CYSLTR2Q9NS75 346 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZBTB40Q9NUA8 1239 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 SEPT11Q9NVA2 429 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 HAUS2Q9NVX0 235 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 CISD1Q9NZ45 108 aaKnown RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 FBXO9Q9UK97 447 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 UTYO14607 1347 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 LY6G6EA0A0G2JKS1 128 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 A0A0U1RQF3 1178 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PRSS47A8MTI9 375 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 I6L893 689 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 GTPBP1O00178 669 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 LDB2O43679 373 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 DOK2O60496 412 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 GFPT2O94808 682 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 NKX2-2O95096 273 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 EIF2S1P05198 315 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CDK4P11802 303 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 LAMP2P13473 410 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ARSBP15848 533 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 TNFRSF1BP20333 461 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 MYF6P23409 242 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CDAP32320 146 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 THPOP40225 353 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 MLH1P40692 756 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 RASSF2P50749 326 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 DRG2P55039 364 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZP1P60852 638 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 SORDQ00796 357 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CEBPZQ03701 1054 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PDE1CQ14123 709 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 MYBPC2Q14324 1141 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 DRAP1Q14919 205 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF284Q2VY69 593 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 FBXO46Q6PJ61 603 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CYP20A1Q6UW02 462 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 Q6ZSV7 163 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 TRILQ7L0X0 811 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PATL1Q86TB9 770 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 SFTPA2Q8IWL1 248 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CCDC13Q8IYE1 715 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 CCDC105Q8IYK2 499 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZBTB2Q8N680 514 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PSPC1Q8WXF1 523 aaKnown RBP3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 POMGNT1Q8WZA1 660 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 USP6NLQ92738 828 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ERGIC1Q969X5 290 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 HMCESQ96FZ2 354 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 VCPIP1Q96JH7 1222 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 WDFY2Q96P53 400 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 TKTL2Q9H0I9 626 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 MUC13Q9H3R2 512 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 SH2D4AQ9H788 454 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 KAT14Q9H8E8 782 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 SCPEP1Q9HB40 452 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 ASAH2Q9NR71 780 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 RRP7BPQ9NSQ0 103 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM51Q9NW97 253 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 HCFC1R1Q9NWW0 138 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PLK2Q9NYY3 685 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 DLGAP2Q9P1A6 1054 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 RNF7Q9UBF6 113 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 INSL5Q9Y5Q6 135 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 LYVE1Q9Y5Y7 322 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 RUSC2Q8N2Y8 1516 aa3.53□□□□□ -1.84
TRAPPC11-207ENST00000511409 LIPT2A6NK58 231 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 BECN2A8MW95 431 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 MYO1GB0I1T2 1018 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 B4DGG1 531 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 PTGES3LE9PB15 166 aa3.52□□□□□ -1.85
TRAPPC11-207ENST00000511409 VWA5AO00534 786 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms