RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 FEM1CQ96JP0 617 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 SPATA13Q96N96 652 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 RBM15Q96T37 977 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 NAPGQ99747 312 aaPredicted RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 ADGRE3Q9BY15 652 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 MIR1-1HGQ9H1L0 117 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 GBA3Q9H227 469 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PCDH12Q9NPG4 1184 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 VPS45Q9NRW7 570 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 EIF2B4Q9UI10 523 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 DNPEPQ9ULA0 475 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PHTF1Q9UMS5 762 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 RPL26L1Q9UNX3 145 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 DMTF1Q9Y222 760 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 ITM2BQ9Y287 266 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 SDK1Q7Z5N4 2213 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 A0A1B0GTW7 788 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 CTAGE9A4FU28 777 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
COL6A6-203ENST00000511332 SPINT1O43278 529 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 MMP2P08253 660 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 CYP2A6P11509 494 aaPredicted RBP12.94□□□□□ -0.34
COL6A6-203ENST00000511332 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
COL6A6-203ENST00000511332 GRIA4P48058 902 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 EPHB1P54762 984 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 SKOR1P84550 965 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM52BQ4KMG9 183 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 NAPEPLDQ6IQ20 393 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 ZCCHC9Q8N567 271 aaKnown RBP12.94□□□□□ -0.34
COL6A6-203ENST00000511332 NSMCE3Q96MG7 304 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 WDR24Q96S15 920 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM121Q9BTD3 319 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 C1QTNF7Q9BXJ2 289 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 GGT7Q9UJ14 662 aa12.94□□□□□ -0.34
COL6A6-203ENST00000511332 TTC7AQ9ULT0 858 aaPredicted RBP12.94□□□□□ -0.34
COL6A6-203ENST00000511332 ZNF106Q9H2Y7 1883 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 CACNA1EQ15878 2313 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 GOLGA6BA6NDN3 693 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 BCAT2O15382 392 aaPredicted RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 FZD6O60353 706 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ANXA9O76027 345 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ITGAVP06756 1048 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ELFN1P0C7U0 828 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 CD68P34810 354 aaPredicted RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ACTN2P35609 894 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 AFF3P51826 1226 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 RACK1P63244 317 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 FAM193AP78312 1265 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 SGCGQ13326 291 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 MPP3Q13368 585 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 PRPSAP1Q14558 356 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 SIX1Q15475 284 aaPredicted RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 TEAD4Q15561 434 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 OASLQ15646 514 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 CCNG2Q16589 344 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 DUOXA1Q1HG43 343 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 P3H1Q32P28 736 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 SEL1L3Q68CR1 1132 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 DRICH1Q6PGQ1 229 aaPredicted RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ARHGEF18Q6ZSZ5 1173 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ACTRT1Q8TDG2 376 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 C1orf54Q8WWF1 131 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 TADA1Q96BN2 335 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 LRRC45Q96CN5 670 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 RTP4Q96DX8 246 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 IFT43Q96FT9 208 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 SERAC1Q96JX3 654 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 WRAP53Q9BUR4 548 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 USP29Q9HBJ7 922 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
COL6A6-203ENST00000511332 ZNF148Q9UQR1 794 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 CHKBQ9Y259 395 aa12.93□□□□□ -0.34
COL6A6-203ENST00000511332 MYLKQ15746 1914 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 A0A0J9YYE9 177 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PRAMEF26H0Y7S4 382 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 KHNYNO15037 678 aaKnown RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 PMPCBO75439 489 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 TM7SF2O76062 418 aa12.92□□□□□ -0.34
COL6A6-203ENST00000511332 MT-CYBP00156 380 aaPredicted RBP12.92□□□□□ -0.34
COL6A6-203ENST00000511332 TRBC1P01850 177 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms