RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 CCDC25Q86WR0 208 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 DCUN1D3Q8IWE4 304 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 LRRC57Q8N9N7 239 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 LSM14AQ8ND56 463 aaKnown RBP3.02□□□□□ -1.93
SUB1-208ENST00000511175 CTCFLQ8NI51 663 aaPredicted RBP3.02□□□□□ -1.93
SUB1-208ENST00000511175 GRAMD1AQ96CP6 724 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 APOPT1Q96IL0 206 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 SLF1Q9BQI6 1058 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 SFXN1Q9H9B4 322 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 BRF2Q9HAW0 419 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 ZDHHC7Q9NXF8 308 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 NFU1Q9UMS0 254 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 PSAT1Q9Y617 370 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 PIAS3Q9Y6X2 628 aa3.02□□□□□ -1.93
SUB1-208ENST00000511175 IGLV5-52A0A0A0MRZ9 124 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 SLC38A8A6NNN8 435 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 KCNJ18B7U540 433 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 KIF28PB7ZC32 967 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 H7C0S8 307 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 M0QYT0 321 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 LARGE1O95461 756 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 STARD3NLO95772 234 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 CER1O95813 267 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 CFC1BP0CG36 223 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 CFC1P0CG37 223 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 NR2F1P10589 423 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 ACSL1P33121 698 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 RGS2P41220 211 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 VEGFCP49767 419 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 RBM5P52756 815 aaKnown RBP eCLIP3.01□□□□□ -1.93
SUB1-208ENST00000511175 NUDT6P53370 316 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 IFI35P80217 286 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 MAMLD1Q13495 774 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 RPS6KA2Q15349 733 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 TBCEQ15813 527 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 SLC10A5Q5PT55 438 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 SLC30A6Q6NXT4 461 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 WDR93Q6P2C0 686 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 FAM43BQ6ZT52 329 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 DIS3L2Q8IYB7 885 aaKnown RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 CCDC191Q8NCU4 936 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 NFKBIDQ8NI38 313 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 SLC2A12Q8TD20 617 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 KCNG4Q8TDN1 519 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 USP6NLQ92738 828 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 MCRS1Q96EZ8 462 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 RADILQ96JH8 1075 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 PGLYRP2Q96PD5 576 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 MPHOSPH8Q99549 860 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 BAG1Q99933 345 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 PAAF1Q9BRP4 392 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 MECRQ9BV79 373 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 BRD8Q9H0E9 1235 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 MUC13Q9H3R2 512 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 GAREM1Q9H706 876 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 PLEKHA2Q9HB19 425 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 KCNK9Q9NPC2 374 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 TMLHEQ9NVH6 421 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 SLC25A10Q9UBX3 287 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 CFDP1Q9UEE9 299 aaPredicted RBP3.01□□□□□ -1.93
SUB1-208ENST00000511175 ZBTB1Q9Y2K1 713 aa3.01□□□□□ -1.93
SUB1-208ENST00000511175 LOC105369274A0A096LPK9 316 aa3□□□□□ -1.93
SUB1-208ENST00000511175 LOC102723532A0A0G2JNH3 316 aa3□□□□□ -1.93
SUB1-208ENST00000511175 hCG_1807616A0A1W2PRN6 198 aa3□□□□□ -1.93
SUB1-208ENST00000511175 PABPN1LA6NDY0 278 aaKnown RBP3□□□□□ -1.93
SUB1-208ENST00000511175 ASAP2O43150 1006 aa3□□□□□ -1.93
SUB1-208ENST00000511175 XPNPEP2O43895 674 aa3□□□□□ -1.93
SUB1-208ENST00000511175 ZG16O60844 167 aa3□□□□□ -1.93
SUB1-208ENST00000511175 GJB3O75712 270 aa3□□□□□ -1.93
SUB1-208ENST00000511175 HEXIM1O94992 359 aaKnown RBP3□□□□□ -1.93
SUB1-208ENST00000511175 GNLYP22749 145 aa3□□□□□ -1.93
SUB1-208ENST00000511175 PGM1P36871 562 aa3□□□□□ -1.93
SUB1-208ENST00000511175 NLRP5P59047 1200 aa3□□□□□ -1.93
SUB1-208ENST00000511175 CREB5Q02930 508 aa3□□□□□ -1.93
SUB1-208ENST00000511175 SF3A3Q12874 501 aaKnown RBP eCLIP3□□□□□ -1.93
SUB1-208ENST00000511175 CDC16Q13042 620 aa3□□□□□ -1.93
SUB1-208ENST00000511175 CAMK1Q14012 370 aa3□□□□□ -1.93
SUB1-208ENST00000511175 CSHL1Q14406 222 aa3□□□□□ -1.93
SUB1-208ENST00000511175 WTAPQ15007 396 aa3□□□□□ -1.93
SUB1-208ENST00000511175 PSMD6Q15008 389 aa3□□□□□ -1.93
SUB1-208ENST00000511175 TBRG1Q3YBR2 411 aa3□□□□□ -1.93
SUB1-208ENST00000511175 DUSP28Q4G0W2 176 aa3□□□□□ -1.93
SUB1-208ENST00000511175 C14orf177Q52M58 125 aa3□□□□□ -1.93
SUB1-208ENST00000511175 CBWD5Q5RIA9 395 aa3□□□□□ -1.93
SUB1-208ENST00000511175 HECTD3Q5T447 861 aa3□□□□□ -1.93
SUB1-208ENST00000511175 PMS2CLQ68D20 193 aa3□□□□□ -1.93
SUB1-208ENST00000511175 AAGABQ6PD74 315 aa3□□□□□ -1.93
SUB1-208ENST00000511175 ZSCAN2Q7Z7L9 614 aaPredicted RBP3□□□□□ -1.93
SUB1-208ENST00000511175 PRPF39Q86UA1 669 aaKnown RBP3□□□□□ -1.93
SUB1-208ENST00000511175 OR4N4Q8N0Y3 316 aa3□□□□□ -1.93
SUB1-208ENST00000511175 TMEM217Q8N7C4 229 aa3□□□□□ -1.93
SUB1-208ENST00000511175 POC1AQ8NBT0 407 aa3□□□□□ -1.93
SUB1-208ENST00000511175 LINS1Q8NG48 757 aa3□□□□□ -1.93
SUB1-208ENST00000511175 HMGB4Q8WW32 186 aa3□□□□□ -1.93
SUB1-208ENST00000511175 NR1H4Q96RI1 486 aaPredicted RBP3□□□□□ -1.93
SUB1-208ENST00000511175 EPYCQ99645 322 aa3□□□□□ -1.93
SUB1-208ENST00000511175 HERC2P3Q9BVR0 1158 aa3□□□□□ -1.93
SUB1-208ENST00000511175 FRMD8Q9BZ67 464 aaPredicted RBP3□□□□□ -1.93
SUB1-208ENST00000511175 GFRA4Q9GZZ7 299 aa3□□□□□ -1.93
SUB1-208ENST00000511175 KLHL31Q9H511 634 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms