RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 RFC2P35250 354 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 PIK3CBP42338 1070 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 SIGLEC14Q08ET2 396 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 KEAP1Q14145 624 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 KRT81Q14533 505 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 TCTN1Q2MV58 587 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ISM2Q6H9L7 571 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 TLDC1Q6P9B6 456 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ADGRA1Q86SQ6 560 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 RNF152Q8N8N0 203 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ZBTB8BQ8NAP8 495 aaPredicted RBP7.08□□□□□ -1.28
USP53-206ENST00000510737 SEZ6LQ9BYH1 1024 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 TRIM2Q9C040 744 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ABHD16BQ9H3Z7 469 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 MAP6D1Q9H9H5 199 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 ERVK-5Q9HDB9 667 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 CTNNA3Q9UI47 895 aa7.08□□□□□ -1.28
USP53-206ENST00000510737 RIF1Q5UIP0 2472 aaKnown RBP7.08□□□□□ -1.28
USP53-206ENST00000510737 A0A1B0GUL7 405 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 LOC730098B7Z3J9 87 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 DHHO43323 396 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 PPP6R2O75170 966 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 CIAO1O76071 339 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 ACAA1P09110 424 aaPredicted RBP7.07□□□□□ -1.28
USP53-206ENST00000510737 SUPT20HL2P0C7V6 817 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 SHMT1P34896 483 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 TNFAIP2Q03169 654 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 ATP1A4Q13733 1029 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 RALBP1Q15311 655 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 INO80DQ53TQ3 878 aaPredicted RBP7.07□□□□□ -1.28
USP53-206ENST00000510737 MRNIPQ6NTE8 343 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 KAT2AQ92830 837 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 URB1-AS1Q96HZ7 61 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 USP44Q9H0E7 712 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 NUP62CLQ9H1M0 184 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 IL21RQ9HBE5 538 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 PNPLA8Q9NP80 782 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 SIRT3Q9NTG7 399 aaPredicted RBP7.07□□□□□ -1.28
USP53-206ENST00000510737 FBXO28Q9NVF7 368 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 RIPK3Q9Y572 518 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 ZNF292O60281 2723 aa7.07□□□□□ -1.28
USP53-206ENST00000510737 ZNFX1Q9P2E3 1918 aaKnown RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 RHODO00212 210 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 PODXLO00592 558 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 BAG3O95817 575 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 FGF3P11487 239 aaPredicted RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 PECAM1P16284 738 aaPredicted RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 MLH1P40692 756 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 RFX2P48378 723 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 DYNLL1P63167 89 aaKnown RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 ZNF543Q08ER8 600 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 NFATC4Q14934 902 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 GLE1Q53GS7 698 aaKnown RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 ARHGAP15Q53QZ3 475 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 ATF7IPQ6VMQ6 1270 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 RPAINQ86UA6 219 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 SPICE1Q8N0Z3 855 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 MYO1HQ8N1T3 1032 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 TMEM105Q8N8V8 129 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 EXD3Q8N9H8 876 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 OR52N4Q8NGI2 321 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 RIPOR3Q96MK2 946 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 OBP2AQ9NY56 170 aa7.06□□□□□ -1.28
USP53-206ENST00000510737 MAP1BP46821 2468 aaKnown RBP7.06□□□□□ -1.28
USP53-206ENST00000510737 RPS10-NUDT3A0A1W2PQS6 291 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 VWA5AO00534 786 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 MDM4O15151 490 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 GABRB3P28472 473 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 CIITAP33076 1130 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 IL15P40933 162 aaPredicted RBP7.05□□□□□ -1.28
USP53-206ENST00000510737 GSTM5P46439 218 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 GPM6BQ13491 265 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 EPC2Q52LR7 807 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 NAA16Q6N069 864 aaPredicted RBP7.05□□□□□ -1.28
USP53-206ENST00000510737 HMBOX1Q6NT76 420 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 NOL8Q76FK4 1167 aaKnown RBP7.05□□□□□ -1.28
USP53-206ENST00000510737 ARMCX2Q7L311 632 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.05□□□□□ -1.28
USP53-206ENST00000510737 KIAA2013Q8IYS2 634 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 SF3B5Q9BWJ5 86 aaKnown RBP7.05□□□□□ -1.28
USP53-206ENST00000510737 PCDHAC1Q9H158 963 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 CD93Q9NPY3 652 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 SCN5AQ14524 2016 aa7.05□□□□□ -1.28
USP53-206ENST00000510737 LINC01565O15544 149 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 NCK2O43639 380 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 TBX10O75333 385 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 TSHRP16473 764 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP53-206ENST00000510737 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 TLK2Q86UE8 772 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 TXLNGQ9NUQ3 528 aa7.04□□□□□ -1.28
USP53-206ENST00000510737 PA2G4Q9UQ80 394 aaKnown RBP7.04□□□□□ -1.28
USP53-206ENST00000510737 SETXQ7Z333 2677 aaKnown RBP7.04□□□□□ -1.28
USP53-206ENST00000510737 ASPMQ8IZT6 3477 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 A0A087WYN8 130 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 CLEC18AA5D8T8 446 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 RHPN2P1A8MT19 583 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms