RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PKD1L2Q7Z442 2459 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 AQP9O43315 295 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 MAFKO60675 156 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 PEX11BO96011 259 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 CKMT1AP12532 417 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 LIG3P49916 1009 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 SLC18A3Q16572 532 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 MACC1Q6ZN28 852 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 RBFAQ8N0V3 343 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 ATPAF2Q8N5M1 289 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 FAM181AQ8N9Y4 354 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 OR8K1Q8NGG5 319 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 BTN2A2Q8WVV5 523 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 DNAJC7Q99615 494 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 TSPY26PQ9H489 355 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 CTTNBP2NLQ9P2B4 639 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 RCOR3Q9P2K3 495 aaPredicted RBP23.13■■□□□ 1.29
SNF8-209ENST00000510558 APOBEC3BQ9UH17 382 aaKnown RBP23.13■■□□□ 1.29
SNF8-209ENST00000510558 DMXL2Q8TDJ6 3036 aa23.13■■□□□ 1.29
SNF8-209ENST00000510558 LRP4O75096 1905 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 TRAFD1O14545 582 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 LZTS3O60299 673 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 HSPA9P38646 679 aaKnown RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 CYP4F3Q08477 520 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 MMRN1Q13201 1228 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 AGERQ15109 404 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 CPNE8Q86YQ8 564 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 PHACTR4Q8IZ21 702 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 FAM71BQ8TC56 605 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 LMX1AQ8TE12 382 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 CTNNBL1Q8WYA6 563 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 RFFLQ8WZ73 363 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 PACSIN1Q9BY11 444 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 TCEAL2Q9H3H9 227 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 UVRAGQ9P2Y5 699 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 PNMA8BQ9ULN7 279 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 ZZEF1O43149 2961 aa23.12■■□□□ 1.29
SNF8-209ENST00000510558 ANKRD11Q6UB99 2663 aaPredicted RBP23.12■■□□□ 1.29
SNF8-209ENST00000510558 FREM2Q5SZK8 3169 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 LY6G6EA0A0G2JKS1 128 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 TTC24A2A3L6 582 aaPredicted RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 CD48P09326 243 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 H2AFZP0C0S5 128 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 MYF5P13349 255 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 IL4RP24394 825 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 GJC1P36383 396 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 POLR2LP62875 67 aaKnown RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 E2F1Q01094 437 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 INSM1Q01101 510 aaPredicted RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 RALGDSQ12967 914 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 TARDBPQ13148 414 aaKnown RBP eCLIP23.11■■□□□ 1.29
SNF8-209ENST00000510558 ASTE1Q2TB18 679 aaPredicted RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 ZCCHC8Q6NZY4 707 aaKnown RBP23.11■■□□□ 1.29
SNF8-209ENST00000510558 H2AFVQ71UI9 128 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 BBS5Q8N3I7 341 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 PGBD5Q8N414 524 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 DEF6Q9H4E7 631 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 USP29Q9HBJ7 922 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 SPASTQ9UBP0 616 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 U3KQA8 63 aa23.11■■□□□ 1.29
SNF8-209ENST00000510558 SSU72P8A0A1W2PR75 194 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 CFAP69A5D8W1 941 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 PROSCO94903 275 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 CR2P20023 1033 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 PEX5P50542 639 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 DUSP3P51452 185 aaPredicted RBP23.1■■□□□ 1.29
SNF8-209ENST00000510558 ARSEP51690 589 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 DEFB133Q30KQ1 61 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 ATP13A4Q4VNC1 1196 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 DPPA4Q7L190 304 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 VSTM4Q8IW00 320 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 RNF214Q8ND24 703 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 NSMCE1Q8WV22 266 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 TBATAQ96M53 351 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 NUDCD1Q96RS6 583 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 MGME1Q9BQP7 344 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 LRRC61Q9BV99 259 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 SLC13A1Q9BZW2 595 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 SCUBE2Q9NQ36 999 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 EVA1BQ9NVM1 165 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 ZNHIT6Q9NWK9 470 aaKnown RBP23.1■■□□□ 1.29
SNF8-209ENST00000510558 CFAP47Q6ZTR5 3102 aa23.1■■□□□ 1.29
SNF8-209ENST00000510558 TMEM110-MUSTN1A8MSY1 372 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 HTRA2O43464 458 aaPredicted RBP23.09■■□□□ 1.29
SNF8-209ENST00000510558 MFSD11O43934 449 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 SOCS5O75159 536 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 PCCBP05166 539 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 TPM1P09493 284 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 ELFN1P0C7U0 828 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 PPARDQ03181 441 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 DPYSL3Q14195 570 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 INPP5AQ14642 412 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 PRRT3Q5FWE3 981 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 FAXCQ5TGI0 409 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 LIPIQ6XZB0 460 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 CACTIN-AS1Q8N1I8 211 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 NXPE2Q96DL1 559 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 IL12RB2Q99665 862 aa23.09■■□□□ 1.29
SNF8-209ENST00000510558 APOOQ9BUR5 198 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms