RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FAM87AP0C7U9 286 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 PNLIPP16233 465 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 GLB1P16278 677 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 ITGB6P18564 788 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 MMP8P22894 467 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 LIG3P49916 1009 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
DDX41-211ENST00000510171 UGP2Q16851 508 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 CFAP58Q5T655 872 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 ERAP2Q6P179 960 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 OGFOD3Q6PK18 319 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 STRADAQ7RTN6 431 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 TAF8Q7Z7C8 310 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 RTL3Q8N8U3 475 aaKnown RBP10.5□□□□□ -0.73
DDX41-211ENST00000510171 FAM46DQ8NEK8 389 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 GPT2Q8TD30 523 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 CENPIQ92674 756 aaPredicted RBP10.5□□□□□ -0.73
DDX41-211ENST00000510171 USP7Q93009 1102 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 WDR92Q96MX6 357 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 SEMA3CQ99985 751 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 NAA15Q9BXJ9 866 aaKnown RBP10.5□□□□□ -0.73
DDX41-211ENST00000510171 STK33Q9BYT3 514 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 PCDH12Q9NPG4 1184 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 NEU3Q9UQ49 428 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 DAAM1Q9Y4D1 1078 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 DGKBQ9Y6T7 804 aa10.5□□□□□ -0.73
DDX41-211ENST00000510171 PRAMEF33A0A0G2JMD5 474 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 A0A1W2PQC6 194 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 TERTO14746 1132 aaKnown RBP10.49□□□□□ -0.73
DDX41-211ENST00000510171 SUV39H1O43463 412 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 PRAMEF10O60809 474 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 PIGNO95427 931 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 PCCBP05166 539 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 TPM2P07951 284 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 UCHL3P15374 230 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 ITIH1P19827 911 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 EPHB2P29323 1055 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 PTPN9P43378 593 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 MAPK10P53779 464 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 HDAC4P56524 1084 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 NFKB2Q00653 900 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 MTM1Q13496 603 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 ARHGEF7Q14155 803 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 GRM3Q14832 879 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 AGERQ15109 404 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 CYTH1Q15438 398 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 TBR1Q16650 682 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 HSP90AA4PQ58FG1 418 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 CERCAMQ5T4B2 595 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 NYAP1Q6ZVC0 841 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 SLFN11Q7Z7L1 901 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 VASH2Q86V25 355 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 ZFAND4Q86XD8 727 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 ZNF677Q86XU0 584 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 DNAAF5Q86Y56 855 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 CCDC185Q8N715 623 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 JOSD2Q8TAC2 188 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 EPS8L1Q8TE68 723 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 NTAN1Q96AB6 310 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 ZNF641Q96N77 438 aaPredicted RBP10.49□□□□□ -0.73
DDX41-211ENST00000510171 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 KLC2Q9H0B6 622 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 DPEP2Q9H4A9 486 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 NOL6Q9H6R4 1146 aaKnown RBP10.49□□□□□ -0.73
DDX41-211ENST00000510171 LMBRD1Q9NUN5 540 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 AKAP7Q9P0M2 348 aaPredicted RBP10.49□□□□□ -0.73
DDX41-211ENST00000510171 LRIT1Q9P2V4 623 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 RNF215Q9Y6U7 377 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 DOCK9Q9BZ29 2069 aa10.49□□□□□ -0.73
DDX41-211ENST00000510171 COL6A6A6NMZ7 2263 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 C9orf172C9J069 976 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 RASA4BC9J798 803 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 F8VZ95 297 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 CACNB4O00305 520 aaPredicted RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 RASA4O43374 803 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 CYP1A1P04798 512 aaPredicted RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 KRT3P12035 628 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 CD82P27701 267 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 ETV5P41161 510 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 CDR2Q01850 454 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 SERINC3Q13530 473 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 PARP15Q460N3 678 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 C14orf28Q4W4Y0 310 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 PHF19Q5T6S3 580 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 TMEM164Q5U3C3 297 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 BRAT1Q6PJG6 821 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 ZNF574Q6ZN55 896 aaPredicted RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 SPRED1Q7Z699 444 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 DTX1Q86Y01 620 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 PYROXD2Q8N2H3 581 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 SLC30A5Q8TAD4 765 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 ENOX1Q8TC92 643 aaKnown RBP10.48□□□□□ -0.73
DDX41-211ENST00000510171 SLC20A1Q8WUM9 679 aa10.48□□□□□ -0.73
DDX41-211ENST00000510171 OR1E3Q8WZA6 343 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms